SimpleSearch - Line and FST details
Line specific information
| Line ID | 347G10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N433298) |
| Segregation Analysis | 34:33:26 |
| Confirmed for Hit | At5g21030 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g21030
| Sequence (A. th genome BLAST matches underlined) | >79-K016241-022-347-G10-8409 TATCCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATATCCTGATTTTCTGATTT TTTTTTTTGTTTCCCCCCCGAAAAGGCTAAAAATACCCTGAAAAATCTTAAAGTTAAAGC CCCCCCTTCAATTCAAAAATACAAAATACCCGGACTAAGGGGACTACCCTGCAAAAATCA AACGAATGTGGGGAGTTGATATTAATTTAAAGTTTCCTGGTTTGGCTTCCCGTTAATCCC TTTTTCTGGGGGGATTAAGGTTTACTGGGAAAAAAAGGAACCAAAACGGGAAATTTGAGG AGGTTGAAATTACAGGGCCCAATTACTTCCCTAGGGGACCTCCCCCAAAAGGGAGAANNN NNNTTNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTAATTTTNAAATGGTTACCAANNNTA AATAAAAAANNNNNNNNNNNNNNNTTTTTTNNNNTNTTTTTTTTNTTATATTAAATATAA NNTAATTTNNTTTNNATTTAANTAAATTAAAAAAAAAAAAAAAAATAAATTNAATAAAAA ATAAAAATTTTAAAATAAATTTTTTTTTAAAAAAAATTTAAATTTTNAATAAAGAATAAT TAATTGGTTTTTTTTTGATTTTTATAAATTAAAANAGAGAAATATTTTNNTAAATTTTTT NTAAATATTTATNAATATTAAAGAGGAGGAATAATAAAAAAGTGGAGGGGGGGTGGTTGT GNAAATNNAGAGAGTTTTTAATTGAAGAAAATATATGGGGGGAAAATATT |
| GenBank Accession | AL953018 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:7143132 - go to primer design |
| BLAST e Value | 9e-39 |
| Hit Clone Code (BAC ID) | F22D1 |
| Hit Gene Code | At5g21030 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | PAZ domain-containing protein / piwi domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g04740
| Sequence (A. th genome BLAST matches underlined) | >79-K016235-022-347-G10-8409 TGTCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGATTTTCTGATTT TTTTTTTTGTTTCTCCCCCTGTTAGGGTAAAAATCCCCGGAAAATCCTGAAATTTAGAGC CCTCCCTCCAAAACCAACTCCAAATAACCGGGTCTTTTGGCCCCTCTCTCCAAAATATAA ACGGGATGTTGGAAGTGGAAATTAATTCTAAAACTTCCTTGTTTCGCTCACCGGTTCTCC CGCTTGCCCGGGGGAATTTAGGTTAACTTGGAAAAAAGGGACCCAAACCTGGAAATTGGA GGGGGTAGAAACTACTGTGCCGCATACCTTCCAAATGGAATCCCCCGGAATGTACGTATG TAGGTTTTGACTACCTCTGTATCTATCTCTGCGGATTCCACGTCTATGTTGACATCAGCC ATCACTTTGATCATCTCTACGACAAGACCTGGCCTGTCCGCTGTCTCTATGACAAGCAGG CTATGGGATC |
| GenBank Accession | AL953017 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:1368698 - go to primer design |
| BLAST e Value | 2e-67 |
| Hit Clone Code (BAC ID) | T1E3 |
| Hit Gene Code | At5g04740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ACT domain-containing protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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