SimpleSearch - Line and FST details
Line specific information
Line ID | 348F07 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N433379) |
Segregation Analysis | 100:100:92 |
Confirmed for Hit | At4g08390 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g23540
Sequence (A. th genome BLAST matches underlined) | >54-K016243-022-348-F07-8409 TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGACAATTCGATTG TAAAATTCTATTACCTCTTTTCCCTAAGTCACAAAATCCCGAGTGAACCACGATTTGGAT ATTGAAATCGATGCCTGCTCAGCTAAACCAATTTTACTCCTATGGAGATCTCNCCTATCG TGAGTCTCTCACACTCGACAGAACCCTCCTTTCTCCTCCTCCCACAACAACAACAACAAC GATGTCTTCTTCTCTCCTATCTACCACCGCCGCTTCTCTTCTCCTCCGCTCCTCCTCCTC CTCCTCTATATCCACTCTCACTCTCTCCGCTTCCTCCTCTCACTACATCCGCAGATCGCT CTCCTCTACTCCACGAATCTCTTCTTCTTCATCCCTCTCCCACGAATATCACCACTCCCC CCCTCCCAATTTCCCTTATCTCTTCAATCTACGAATCATGACCTAGAACTTCCACAATCG AATTTGAGCTCAAAAGAAATATCGAATAGCGTCAATGAGTCTGACCTTCATACTCCACCA CCGCCGCTACTACTTCTTCATCATACCATCCAGATCAGCATGAAAAACGCTTGCTCACGC CCCCTTTTAATGGAGAATTTCCTCTAATAAACTCTTTAACCGAACATTGTATTGATTTGC TATGGGA |
GenBank Accession | AL953119 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:10026179 - go to primer design |
BLAST e Value | 4e-16 |
Hit Clone Code (BAC ID) | F26B6 |
Hit Gene Code | At2g23540 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | GDSL-like Lipase/Acylhydrolase superfamily protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Gene hit At4g08390
Sequence (A. th genome BLAST matches underlined) | >54-K016247-022-348-F07-8409 TATCCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGACAAATTCATT GTAAAATTCGATTACCTCTTTTCCCAAAGTTTTCAAAATCGGAGTGAACCAGGATTTGGA TATTGAAATCGAGTCGGTTCAGTTAAACCGATTTTAACCTATGGGATCCTCCCTATAGTG AGACTCTCACACTCAACGGAACCCTCCTTTCTCCTCCTCCCACAACAACAACAACAATCA TGACTTCTTCTCTCCTATCTACCACCGCCGCTTCTCTTCTCCTCCGCTCCTCCTCCTCCT CCTCCAAATCCACTCTCACGCTCTCCGCTTCCTCCTCACACTCCTACGTAAGATATCTCT CCTCTACTCCGCGTCTCTCTTCTTCTTCATCCCTCTCTCAAGTATATCTACACTCTCTCC CTTCCAATTTCCTTTATCTCTTCAATATCTGAATCTGATGTTGTAATTTCCACGATCTAA TGTGACTTCAGAAGAAATATCGAATTGCGTCGGAGAATCGGAGTTTCAACTCCACCACCG CCGCTACTAAATCTTCATCTTCAGATCCTGATCAGTTGAAGAACACTATGGGAT |
GenBank Accession | AL953120 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:5314890 - go to primer design |
BLAST e Value | 8e-73 |
Hit Clone Code (BAC ID) | T28D5 |
Hit Gene Code | At4g08390 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | stromal ascorbate peroxidase |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |