SimpleSearch - Line and FST details


Line specific information

 
Line ID 381B12
Vector Used pAC161
Line Availability available as T3 set from NASC (N436504)
Segregation Analysis 50:50:48
Confirmed for Hit At4g10457
Parent of DUPLO pair none
Parent of pair(s) 12615

Gene hit F14F18

 
Sequence (A. th genome BLAST matches underlined) 
>90-K026825-022-381-B12-8409
AATTTTTCCTTGGACCTCCCCTAAATAGAACCAAAAAAAAGTTTAAGCTCCCTTTATGTT
CCGTTTTTATTGTCTGATTTCCAAGGATTTAAGCCAAAAAAAAAGCCCATTTGAAACTTG
AAATGTTAATCCATGGGTAGGGAATCCCCCCCAAAGTGAGAC
GenBank Accession CR396872 [GenBank]
Graphic View Graphic view of sequence CR396872 of line 381B12
Predicted Position of Insertion Chr5:3821703 - go to primer design
BLAST e Value 2e-13
Hit Clone Code (BAC ID) F14F18
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g10457

 
Sequence (A. th genome BLAST matches underlined) 
>90-K017264-022-381-B12-8409
GATCCTGATATTTCCCGGACATGAAGCCATTTAGCTTCGAATATATCCTGTATTGACAGC
TATTCTCACAGCTGCGGATTCTACTTTCGAAAGATTGCACGCCTGGGGATATGCATATGG
TATACTACGCGAGAAATTCATCGTGCTTAATTACTTATTTAACGCAATATGATCGGCAGA
CGCCATTTCGTGACGCTAACATATGACCGACACTCGTCGTAGATATTAGATAGTTCAAGA
CTGGCAAAACACAAAAAGACATTGCATGAAACTAACGGCTGCCGCATACTCGTACTATAT
TTTACTTAGCTCGAGACTGGTATAAAAAAAAAAAAAGTTGTTAAAAAACCCCCCTCAAAC
TACATGTTCCACGCTAGGAGATGGGGGACCGCCCCCTAGGGAAAGGAGACACGTTTTTAG
CAGGACCACGTTACAAAGAAGGAGCCGTTAGCGCCAACCAGGGTTCTCCACCCTACGACT
AAAGCATTCTTGTCTTGGTTTGGTAAAGGTGCACGCGGGTTAAGCCCAATCCAAATTTGG
TGGAAGGTGACAAATTTTGGAGGCAGCTTTGGAGACAGCTGGTAAAGGAACTTGTAGAGG
CAAACCAAGAGGGATCCCAGAGGGAACCTA
GenBank Accession BX004572 [GenBank]
Graphic View Graphic view of gene At4g10457
Predicted Position of Insertion Chr4:6467136 - go to primer design
BLAST e Value 1e-56
Hit Clone Code (BAC ID) F7L13
Hit Gene Code At4g10457 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SCR-like 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37