SimpleSearch - Line and FST details
Line specific information
| Line ID | 396F02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N437982) |
| Segregation Analysis | 50:49:46 |
| Confirmed for Hit | At3g25560 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g25560
| Sequence (A. th genome BLAST matches underlined) | >16-K118779-0022-396-F02C-35St TCCACTATCCTTCGCAGACCCTTCCTCTATATAGGAAGTTCATTTCATTTGGAGAGGACA GGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTCATGT TCCAGCTACATGGATCAACTGCTGTGTCATCCCAATTCATTAGAACTCCATGAGGATCAG TCAGTGAGCTTTTGATTCCTATTAAGGCAACAACTAAAGAAGAAACAAAAAAAGAAAAGC ATGTTTTAGGAAGAAAAAAGGAGAAACTGAGAAGTGGGGGAAGATTTTGTTGATGAACAT TACCTTCAAAGTTAACACCTTTGTCTGTGAGTTCTGCAGAAGAAGAAGAAAGAAAACAGA TAAAGAAGAAGAAGAAAGTTGAAGAGAACAAAGCATAACTCTTTTTTGCTTCTCTTCTTC CTTGCAACATCTTTGTCCGAATCAAAACTTGTTTTTCTTGAGAGTATTAATCTCTAAGGT GCAGAGTTTGAGGTTTATTTCTTTTGTATAAGAAATATTCTTTTTTTCGATTCTTTGTTT GGAGGTTTTTAAGAAAAAGATGGAACAGAGGATTTTGATTTGGAAGTATTTGTGAGTGAG AGTTAAAGAGGGAAAGAGAAAGAGAAAGATTTGTCTGCCAATTATTTATCTAATGGTCCT CTAGACTGTAAACTGGAAAAGGCCAGAGACAAAATCGGGAAATGTTTAGTTTTCAATCAT GTGATAAAAAAACAGAATTCTATAAGATTTTTATGGTTTATATACTTCGCGCACACAAAA AAAAAAACTTGATTTATATAAAGTTATCTACAAATATGGGCCCTTT |
| GenBank Accession | HG968953 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:9282240 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MWL2 |
| Hit Gene Code | At3g25560 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NSP-interacting kinase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX287057 [GenBank] BX287057 [GenBank] |
Gene hit T16I18
| Sequence (A. th genome BLAST matches underlined) | >14-K018299-022-396-F02-8409 TGATCTGAAATTTCCNGGACATGAAGCCTTTACATTGAATATATCCTGAATAAACAATTG GTAATTACTCTTTCTTCTCTTCAGCGTTTATTAAAGAAAATTGTACATGTCCTCTATTTT AAGGTTTCTTGGAACGAATTGAGCGGGTAAAGAAGGCGTGATATTAATAGCATCATAAAG TACAGATACTTGATACTTGGTAGCTATGGGATCCTCCCCCTAGTGGGGAGAAGTAAAGTG CATGGTGACGGTGTTCGGCATTCTGAATCTCACCGAGGACTCCTTCTTCGATGAGAGCCG GCGGCTATGGGATCCCCCCTATAGTGAG |
| GenBank Accession | FR809524 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:15818916 - go to primer design |
| BLAST e Value | 3e-29 |
| Hit Clone Code (BAC ID) | T16I18 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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