SimpleSearch - Line and FST details
Line specific information
Line ID | 401D07 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N438443) |
Segregation Analysis | 50:46:35 |
Confirmed for Hit | At5g62500 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g62500
Sequence (A. th genome BLAST matches underlined) | >52-K018291-022-401-D07-8409 GATCATGAGATTTCCCGGACATGNAGCCATTTACTCAACATCCTCTCCAAGTGATTCTAT CTTCTAAGACAAGGCAATGGATCATTGTTGCCCTCTACTTTTATTTGTCACAACTTTAAG TTTGGGTCTCTGCAGCAGCTGCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCT CTTTTCCTTCTTCTTCATAACCCTCAAGCCCTATGGGATCCTCCCTATAGTGAGANGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAANNAAAANNNNNNNNNNANNNNNA NAAAAAAAAAAAAAAANNAAGAAAAAAAAAAAAAAAAANAAAAAANAAAAANAAAAAAAA AAAANAAAAAAAAAAAAAAAAAAAAAAAGAAAANANNAAAAAAAANGGNAAANNNNAGGN ANNAAAAGAAAAATAAAAAAAAAAAANNNGAAAAANGAAACCAGAGAAAAGGAAAANGAG AGGGAAAAGGGGGANGGGGGAAGAGGAAAAGGAGAAGGAAAGAAGAGGAAAAAAAAGGAG AGGAAAAGAGAAAGGGGGGGAGAGAGGAGAAAAAGGGGAGAAAAAAGGGGGAGGGAGGAG AAGAGAAGAAAAAAAAAAAGAGAGGGAAGAGAGGAAGAAAGAGAAAAGGGCGAGANGGCA GGNAGAAAAAAAAAAAAAAAAAAGCGGGCGGCGGCAGAAGACGAANACAGAAAAAGCGCG CCGCGCACCGCAAAAGAAAAGAAAAAACGGAAGAGAGGGAACAGAAGGAAGGACGAAGGA ACAGGGGCGCGGCGGGACACAGGGAAAACGCAGAAAAAGAGAAGAGCGGCAGGACAAAAA ACAAACAAGGA |
GenBank Accession | BX287425 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:25095085 - go to primer design |
BLAST e Value | 3e-54 |
Hit Clone Code (BAC ID) | K19B1 |
Hit Gene Code | At5g62500 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | end binding protein 1B |
Insertion Classification | TS2TE (3') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | BX287424 [GenBank] |
Last Updated on 10.06.2021 13:37 |