SimpleSearch - Line and FST details


Line specific information

 
Line ID 403C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N438617)
Segregation Analysis 50:43:33
Confirmed for Hit At5g48485
Parent of DUPLO pair none
Parent of pair(s) 10771

Gene hit At5g48485

Sequence (A. th genome BLAST matches underlined)
>03-K017818-022-403-C01-8409
TATCATGAAATTTCCNGGACATGAACCATTTACAATTGAATTACGGTGTGGACTATGTGT
GATGCTCCACTATAGTGAGAATGGGATCCTCCCTATAGTGATGATTTTTATTACTCCTAT
TCTAAATATCGGATGTTATTAATAAATCGTATTTTCTGCCAAATGGCGTTTATGGGTTAA
CCCCAAAAACTGGTCAAAAGAAAAGAAAGAGGACCAATCGAAAACTACACAAGGCCCAAA
CACGGAAGGGCAATTTCGAAAAATATGTAACCAATAAGCGATAGAGAGAAACCACAAAGC
ACAAATACAGAGGTTTATGGTTTCACTACCTCTGACACAGTATTCAACACTCTGACACCA
AAACAACAAATATTCTTAATTCCGTCTTATCTAATCACTAACCATTTCATTTTCATTCCA
AATAGACGATTATACCCTTAGTACTAAACCAACAAAAATGACAAAGAACACAGATTAAAC
ACAGAACGATTATAGAAGATAGATAGAGAAGCGAAATCATCAACAAAACATAATATAGCC
CGAGATTAATATGCAATTTCACCAAGATTAGAGTTTGTCAAAAGGGGTGAAATTAGAATC
CGAAAGTCATTAGCCTACTCGATCCGGTTTACTGATTACCGGATTCCACAAAAGACAAAA
TAAAAGCATAAACCTATGGATCCCCC
GenBank Accession BX287618 [GenBank]
Graphic View Graphic view of gene At5g48485
Predicted Position of Insertion Chr5:19646336 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MJE7
Hit Gene Code At5g48485 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details