SimpleSearch - Line and FST details
Line specific information
Line ID | 415G03 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N439819) |
Segregation Analysis | 50:49:47 |
Confirmed for Hit | At3g10030 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g10030
Sequence (A. th genome BLAST matches underlined) | >23-K018044-022-415-G03-8409 TATCATGTAGATTTCCCGAACATGAAGCCATTTACGACACCTTAACAATGCCGTTATGCG TCTACTGGCGGTGGTAGCAACCAGAGACGGCGTTAATTATCGGTGAGAGGCTGAAGAAAC GGAAGGAGAAGGCGTCAAGGCGTGAACTATGGGATCCTCCCTATAGTGAGATACATTTTT GAATTGAAAAAAAATGGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCAT TGCTGATCCATGTACATTTCCCGAGGATGGCTTCAATTACAACCTTCTTAATCATTGCGT TAATTTCA |
GenBank Accession | BX288491 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:3094845 - go to primer design |
BLAST e Value | 1e-34 |
Hit Clone Code (BAC ID) | T22K18 |
Hit Gene Code | At3g10030 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | aspartate/glutamate/uridylate kinase family protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At1g48090
Sequence (A. th genome BLAST matches underlined) | >23-K026166-022-415-G03-8409 TTGCATTTACGAATCCTTACGCAAAGATATTGTGGCTTAGAGATTACCCCCAAAAAAGTA TGATAATAATGTGGCTCTGTTGGTACTTCCCATTTNCCACCTCATCATCAATAGCTTACC CGGGTTTGGGGGAACTGATTTCACTTTACCCAAAAACCAAATTTCAGGAGGTTAAATTGT CTAAATTTTGAACACAAAACTCGCTTTAGCGTGTACCCATCCAAACCATATAATGGTTCC AGCCCTACTAATAATATCACATACAGCCAGTATCAAAAACGGCGTCATATTTCCGCGTAC AATTACAACAAATGCTCACTTTTATTATTATACCAATGATACTCTGGGGAGTGATAAAGA TAATCATTATTTGTTATTAATAA |
GenBank Accession | CR397276 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:17748798 - go to primer design |
BLAST e Value | 3e-31 |
Hit Clone Code (BAC ID) | T2J15 |
Hit Gene Code | At1g48090 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | calcium-dependent lipid-binding family protein |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | CR397276 [GenBank] |
Last Updated on 10.06.2021 13:37 |