SimpleSearch - Line and FST details
Line specific information
| Line ID | 418B02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N440046) |
| Segregation Analysis | 100:98:97 |
| Confirmed for Hit | At1g28520 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g28520
| Sequence (A. th genome BLAST matches underlined) | >10-K018138-022-418-B02-8409 TTTCCCGGACTGAAGCCATTTAAAGGCACAAGCATCACACTTGTTGATCTCATATTCGTA AAGATGCCATTCGAAATGGTGCAGAGGCTGTGGATCCATGTAGTAAGATCTCTTCAGCCC TCCAAACTCGACCATGATCTGTTTACGTGACTCGTGCCAACCACGACCATTGTAGTCTGG TAAAGATCTTTGCTTTCTGTTCCCGCTCTCAAAGGCCCTCCTTGGCTTGTCAAAGAATAG CCACTCCCTTAGTGTCTCACTCTCCAGAACCGTGAGATCAAAGAGCTCTACAGTCATCAA GATTTGAGTATGATCAGCTCAAGAATGGTGATCAATTAACATACTTGTGAATGAATTCCA AGAGAGTAAAGCCTACCTGGAGCATTCCATGGAGATTTAGCAGTTGCAGCTCCTTCACAT TCGGGAATACCAACATCTTTCCCTCCAGCCTTTGCACTAAGAGCAGCANAAAGCAGACCG TCTTTTAGGCCGATACCTCCAGGACGCACCACCGGATTCATACCTGGTGGCCCTTCATTG AAAGCCAGTGCAGCGTGGAAGCTGCTGCAGTAATCCTGGAACCAATCAAATCCCTGAGCT GGCCTAT |
| GenBank Accession | BX288603 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:10031181 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F3M18 |
| Hit Gene Code | At1g28520 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | vascular plant one zinc finger protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit K18B18
| Sequence (A. th genome BLAST matches underlined) | >10-K018099-022-418-B02-8409 ATTCCCGGACTGAAGCCTTTACATTGAATACTCATTGAGTATTTGAGAAAGGTTAAACGT TAATGTTTTTGATTTATTTACTCACCCTGAAAAATGTATCAGAAAGTCAAAAACAAAAGG CATATATAACTTTACACATACATATATATCATCATACATGTACACATACCCATACACATA CACATACNTAAATGTAATTGACTTCTGTTCGGAAGTAAGATACCGACCAGTGAGAAGAAT CTCTCACATGAGAATCTATCTCTTATCTAANATGGACAACAGTTCTCAGTCATTGCATGC TTTTGGGTATTGACACTCTACGAAAATATAAACTTANCAAATGTCATACTTGCTTGTGTA TATAGATTTNGGGTAAATACATGCATAAATGTCGATNAATTATATTGAAACTTTCATTGA TGCTTTTGAAATTAACCCAAAGGGACC |
| GenBank Accession | BX288602 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:23850397 - go to primer design |
| BLAST e Value | 7e-98 |
| Hit Clone Code (BAC ID) | K18B18 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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