SimpleSearch - Line and FST details


Line specific information

 
Line ID 420G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N440299)
Segregation Analysis 50:50:45
Confirmed for Hit At4g02390
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g41762

 
Sequence (A. th genome BLAST matches underlined)
>23-K018101-022-420-G03-8409
TGATCTGTAGTTTCCCGGACATGAAGCCATTTTTGAATATATTGACCTAGGCTGTACCCG
AGTGTGAGCGAGGTGTGAGTGTCGCCCATGGGCATCGACACCTTGCGGCTATTGTATCTT
CCCTATCGTGAGAATTCCCCTCGAGAGCGTTAGCTCTTAC
GenBank Accession BX288857 [GenBank]
Graphic View Graphic view of gene At3g41762
Predicted Position of Insertion Chr3:14196472 - go to primer design
BLAST e Value 1e-24
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g41762 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At4g02390

Sequence (A. th genome BLAST matches underlined)
>23-K018140-022-420-G03-8409
ATGAAGCACTTACTGATATATTGATCTATGGGATCCTGCTTATAGTGAGACAGATTATAA
CGCGGATAATCTACCCCCGGGAAAGCTAAGGTATGAAGATAATCTCATTCATATTTCACA
CAAGTTCCTTATCTCAAACCGCAATGAATTATGATTTACTATTTTTGTACTGTACCTTGA
TTTGTTATTTGATGGTTGCAGCACAAAAGGTGTGGGGAAAACAGCACCAAACCCATCAGA
GGCTCAAACACTATGGGATCCTCCCCTATAGTGAG
GenBank Accession BX288858 [GenBank]
Graphic View Graphic view of gene At4g02390
Predicted Position of Insertion Chr4:1053513 - go to primer design
BLAST e Value 6e-111
Hit Clone Code (BAC ID) T14P8
Hit Gene Code At4g02390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation poly(ADP-ribose) polymerase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details