SimpleSearch - Line and FST details
Line specific information
Line ID | 422C06 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N440446) |
Segregation Analysis | 50:47:45 |
Confirmed for Hit | At2g14760 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g14760
Sequence (A. th genome BLAST matches underlined) | >43-K017808-022-422-C06-8409 TATATGGTTCACCGTGTACTATCGTGTACCTCTCCTATAGTGAGATTGGTCCTATGGGAT CCTCCTCTATAGTGAGAGAGAAAGCTTTGTCTTTCTCTATATCTGTTATAGCATGAGTTA AAATCTGTATTTAGTCATTGGTAATTCAATACAAAAAGAAGAGGATCAGACCTATACAAA TCCTTGGAGGGGAGATAAATCCAGGTTCAACTGTATCTATTATGTTAATAATATAGAGTT GTGAAGAAAATAATGAATGTAAGGAAAAGGTACAACTATGGGATCCTCCCTTATAGTGAG |
GenBank Accession | BX288984 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:6323412 - go to primer design |
BLAST e Value | 2e-104 |
Hit Clone Code (BAC ID) | F26C24 |
Hit Gene Code | At2g14760 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit At4g19150
Sequence (A. th genome BLAST matches underlined) | >43-K017846-022-422-C06-8409 TTTCCCGGGAGCTGCATGTGTCATACTCATTGCTGATCCATGTAGGCGGAAAAATCGCCT TTTTTCTCTTTTATATCAGTCACTTACATGTGTGACCGGTTCCCAATGTACGGCTTTGGG TTCCCAATGTACGGGTTCCGGTTCCCAATGTACGGCTTTGGGTTCCCAATGTACGTGCTA TCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCTGCTATGGGATCCTCCCCTATAGTG AGGANANANANACNNNNANNGANCTCTNNNTGTNNCAATTNTGACAGGCACAANCCGCGA CAAAATAAGAAGATGAAGAGGAGGAGCATCGGCTGATCTTCACTCCGCGGCAAGATCCGG AGATTTAGCAGCAGATCAATCTATTATCATCTCTAATCCTTTGGCTGGTAATTCTA |
GenBank Accession | FR809994 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:10472909 - go to primer design |
BLAST e Value | 2e-39 |
Hit Clone Code (BAC ID) | T18B16 |
Hit Gene Code | At4g19150 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Ankyrin repeat family protein |
Insertion Classification | Promoter |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |