SimpleSearch - Line and FST details
Line specific information
Line ID | 422H04 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N440504) |
Segregation Analysis | 78:32:29 |
Confirmed for Hit | At3g24150 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F12L6
Sequence (A. th genome BLAST matches underlined) | >32-K017808-022-422-H04-8409 GTTACAGCCCACCTTTAACTTCGTCCCCAAGCCAAACTTTTAATTTCGCGATTGTCCGCT ACGCTCCACCTCATCCCAAACAATTACCCGTTTTACCCCTTTGTTAGATAAAGTCAAAAC TATTTGTTAGTTTCTTTGGAAAAACGAATAATATCATATTCTCCGACGATGGACGTGATT CTGCTTTTAATTTTCGGGTCGGTACAGGTTCCACAGCGAGCTCAAATGGTAATATGCATT AATCATATAAGGGCATTTTTGACATGTGAACATGAGAATTATATTAACCTCATCTTCGCT TCATCTTCCTTTTCGCACTATCTTCCTGGATTTTTCGCTTTCGCTAAAAAGAACCTTCAA GCTCTGTCTCTCTCATCGCAATTACTATAAATGAAGAGCAATCACACACAAGACTCGTGA AAGGGGACGATACGCGTTTTTTATTTTGTACAGACTCAAATTCAATTCAATTCAATTTTA TTCATAAGTTCTGGGTTTGAAATTTGAACAATTGACCGAGATTTGGGAACGATGGGTATG GACTTGAGAGTTGTTCCGGCGGAGGAATGGTTGAATCGAGGGATAGATTCGAGTCACGAC GGTGAAATGACCTAGG |
GenBank Accession | BX289044 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:16529802 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | F12L6 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At3g24150
Sequence (A. th genome BLAST matches underlined) | >32-K017846-022-422-H04-8409 TTTCCCGGAATGAAGCATGTACACGAGATCTCAAACGATTCAGAGCTTCAAAGCTTCAGA TCTGTTTCCTTGGATCGGTTAAAAAGAGTTTTAAGGTTGATTTTTCTTTCCACACCATTT GGCGACTCGTACATCGAACTCGCTGATCGGAAAATACTCCCGGATAGAAATTGAACCGAT TAGTTTGATGAGTGAGTGACTTGTTACTTCGATTTGTAGCTGAGTGTGTCACTGCTCAAG TGTGTGAAGAAGGAGAAAATGCCGAGGCCAGGACCAAGACCTTACGAGTGTGTGAAACGA GCTTGGCATAGCGATCGTCATCAACCTATTCGTGGTTCGATTATTCGCCAGATTTTCAGG TTTTTTTCATTCACTCATCTTTCTCAAAACCGTACGCTATGGGATCTCCNNTATTATGTG GAGAAGAATGGCAACTCATTTGATTGTTTGCTTAAATACTACTGCAACGGGTACCCACGG AGGGAGAATGAATGGAAAACAAAGTGTAATAGGGCTTTAATTCATTGCTA |
GenBank Accession | BX289045 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:8725813 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | MUJ8 |
Hit Gene Code | At3g24150 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | hypothetical protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |