SimpleSearch - Line and FST details


Line specific information

 
Line ID 522C07
Vector Used pAC161
Line Availability available as T3 set from NASC (N450047)
Segregation Analysis 50:45:43
Confirmed for Hit At3g30720
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g30720

Sequence (A. th genome BLAST matches underlined)
>51-K020049-022-522-C07-8409
ATGAGTACTTACTACTTTACTTGAGATCATACGTTACGCGTGTAGATTGAATCCGATTTC
TTCGATGAAAACACTATGTGATCCTCCAATATAGTGCGAGGCTTGTTCTTGAGTGTATAT
AAATGGATGGTGTTAGAAAATCTTTGATACTGATTTTGATTGAATTTTTTTTCTTGCAAT
GATTGACTTTGTTTGTTAAATTGTCACCTTAGTAACAAAGGTACAGGTTCCCTTGTTGTG
GTGTGAATTGTATTGCCACCTTGGAGAACATGACTGGGTGGAGATCCTCCCTAGCGTGAG
GGATCCTCCCTATAGTGAGATCCNCCNACCTAATTCGGCCCTCTGCAACATTTTTACCAA
ATTTGTAAAAATCCAAGAGGATGCACTTCGAATGCTTTTTTCCTTTGCTGCTGGAACCAG
AGTTGGAACTTGAATTTTAATTTTTCAAAAACAAACTCTTCAAAATCTCAAATACTAAAT
TTAAATTACCCGTCTTTGCAACATCAAAACTTACCCTATGGGATCCTCCCTATAGG
GenBank Accession BX535921 [GenBank]
Graphic View Graphic view of gene At3g30720
Predicted Position of Insertion Chr3:12348869 - go to primer design
BLAST e Value 1e-61
Hit Clone Code (BAC ID) F21A17
Hit Gene Code At3g30720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation qua-quine starch
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details