SimpleSearch - Line and FST details
Line specific information
Line ID | 541D11 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N451887) |
Segregation Analysis | 50:26:18 |
Confirmed for Hit | At5g65480 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g65480
Sequence (A. th genome BLAST matches underlined) | >84-K023854-022-541-D11-8409 CGGACATGAGCATTTACAATTGAATATATAACCAGTTGCCGAATGGCTTCTTCTCTCCTG CTGCTCCTGGTAATGTTTGTTTCCATTATCATCATCATTCATTAATAGCTATCATGTAAA TTATCTGCATGTTCTTTTAAGAACTTAAGTAATTGGTTTGAGTCTTTTGTTTGTAAATTG ATTTGTTCTTTGTTCTGATGACATGTAAACTGCAGATGGGAAGAACATGGAACAGTGGCT GTCGTCTATGGGGAAGCTATAAATTGGAGATTGGGAAGAATAAGACTATGGGATCCTCCC TATAGTGAGTCGTATTACTCATGGGTTTACACTTAATTGGTAATCCAATGGGTTAATGTC CATAGCGATATTAAAAAATGATAGTAAATTTTGAAAAAACGACAATTTACATTCCGTCGT AATTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGT CTACGTTCCCGTCCAAATGGGGGCTTAAATGAAAAACTTCACGATCGATGCCTTGATT |
GenBank Accession | BX891362 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:26177211 - go to primer design |
BLAST e Value | 3e-139 |
Hit Clone Code (BAC ID) | MNA5 |
Hit Gene Code | At5g65480 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | hypothetical protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |