SimpleSearch - Line and FST details
Line specific information
Line ID | 606E07 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N458135) |
Segregation Analysis | 50:38:32 |
Confirmed for Hit | At4g08960 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g08960
Sequence (A. th genome BLAST matches underlined) | >53-K021122-022-606-E07-8409 AGGAATAATTATGGATCACTGATAATAAGCCCAAAGATGGTTTTGTGACCCAATAATAAG CCCAAAGATGGTTTTGTAACCCAATAATAAGCCCAAAGAATGTAAATAGTGAGTTCTTCA TGGACTAATTCAAGTTTTATTGTATGTGGTGTTGCTGCGTGGGCTACGATGCTTTTCTAC ATACCCTTAACAAGATTACGGCAATATTGTGTTATATTTTGTGGATTCTTTCGAAGCTGA CATGATCTATTGAAACTCTGAATAACCCTGCGCCCGTTCTCGGACATACTTTGGCCATAT ACACAACCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACTGGGCTACACTGANTT GGTNCCTCCTTTTTTCCCTCACCCTAGGCGGCCCTGCGCCCGGGGCCCTCGAATGGGGGG ACCCTTTAAGAAACTAGGGGAACCCGCCCCCAGAATTNNNTTTGCCACAGACCGGGATTT CATTTTATGAGTGGGCTAAGATTATGCGAAAATATACCCCCCTAGACATAGATGC |
GenBank Accession | BX654443 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:5746245 - go to primer design |
BLAST e Value | 5e-175 |
Hit Clone Code (BAC ID) | T3H13 |
Hit Gene Code | At4g08960 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | phosphotyrosyl phosphatase activator (PTPA) family protein |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |