SimpleSearch - Line and FST details


Line specific information

 
Line ID 640A10
Vector Used pAC161
Line Availability available as T3 set from NASC (N461354)
Segregation Analysis 50:31:25
Confirmed for Hit At4g39740
Parent of DUPLO pair none
Parent of pair(s) 1047

Gene hit At4g39740

Sequence (A. th genome BLAST matches underlined)
>09-K106867-0022-640-A10C-3144
AGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGCCCATGACAGGGNACCCGGGGAN
CAGAANGNCGNTTCCCGCCTTCGGTTTAACTATCAGTGTTTGAATTGAATCATGTAGATT
GTAGATTGACGGCGGATTGTTTATTGCTTGACTTGCTTGCTCTCCTTTCGTCGTTGTAAT
GAAGAAAGCCGACGAATCCGGCAAAACCAAGTAGAATCGCAGGCTGAAAATGCAGACAAA
AAAGGGAACATAAGTCCCAAATGAACGATCCAATTCAAGAACACAAGTGAAGGCAACAAG
AGTTTTTAGGATCTATACAACAGCATAACGAGCACGAGAACGAGAAGGAGCTTGAGTTCC
TCCTCCTGTGGGAAAAAGAGGTTTCACATCTGGAATTTCATGGCCCTGTCTTGTTGATTT
ACAGTAATTGACTGATTGAATTCGTTTCGATGGTCCACACCTAAAAAAAAAATCAACGCT
AAGATTCAATATAATGTTTTAAGATCAAGAATTTCGATACTTTAGAAGATAAACCAAACA
AGAAACATTCACAAGACCATCAAAATTCCAACAAAGAGAGACTTTTTTCGCAGATAGAGT
AACAATTGTTCTACTTAAAAAACCCAGATAAAGTAAAATCCCCTAAGCAACTTAAAATTA
GGGACGGGCCCTCCTATTA
GenBank Accession HG969070 [GenBank]
Graphic View Graphic view of gene At4g39740
Predicted Position of Insertion Chr4:18436496 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T19P19
Hit Gene Code At4g39740 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Thioredoxin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details