SimpleSearch - Line and FST details


Line specific information

 
Line ID 646F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N461986)
Segregation Analysis 60:9:9
Confirmed for Hit At3g05910
Parent of DUPLO pair none
Parent of pair(s) 5440, 5559, 5564, 5703, 8700, 49889, 68910, 88068, 88069, 97302

Gene hit At3g05910

 
Sequence (A. th genome BLAST matches underlined) 
>46-K023221-022-646-F06-8409
CATTTACATTGAATATTCATCAATCATAAAAAAGTTAAGGTAAAGAATTTTATTTGCATT
AGTTCACAGATGTTACACAAAACCAATGGCTGCTCAATTCTACAGAACTAAGATCACATC
AAGCGTTCTCTGTGGCTAATAACAGCCTTGACGATTATAGACTACAGAGTTCCAAAGGCC
TATGGGATCCTCCCTATAGTGAG
GenBank Accession BX893397 [GenBank]
Graphic View Graphic view of gene At3g05910
Predicted Position of Insertion Chr3:1765931 - go to primer design
BLAST e Value 6e-82
Hit Clone Code (BAC ID) F10A16
Hit Gene Code At3g05910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectinacetylesterase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR813949 [GenBank] BX659536 [GenBank]

Gene hit At4g01160

 
Sequence (A. th genome BLAST matches underlined) 
>46-K023313w-022-646-F06-8409
TCCGGAATGAGCCTTTACATTGAATATATCCTGACACTATCTCAATACGTGACATGTAGC
ATCTGAAAAATAATAAACATTTCATACTTTATAGATATATACTTTTAATGTTAGGCAAAA
ATATCAAAGTACACAAAAAAAAATAACCATTGGTATGATTAGTGACATCTTCTCTTCTGC
GTTTGCGATCTCTATGGGATCCTCCCTATAGTGAGAGGATGGGATCCTCTGCTATAATAC
GATTCTCGCCTAGCCCCAACCAAGCGAAGTTATAACAGACCACCTCGGTCAGGGAGATGG
GCCCGTAAACCTTACCCAAGCTTCCCTCTCCCTAGACTTTTCATTGCAATCTTAATGACT
ACATAGATAAAGTCATAGATAAAGTATAAGAAGTCCATGTTTAACGACAAACTATTTTTC
GAATTATATAATTATATCCGGACTCATACTCTATTAATGTCGCAGCACTTCTAGTCCTTT
CATATTTTATTCGTCGAATGTGAATACTAAATTGTATATAGATTTTATATGAAAGCTATA
TATAT
GenBank Accession BX893399 [GenBank]
Graphic View Graphic view of gene At4g01160
Predicted Position of Insertion Chr4:496722 - go to primer design
BLAST e Value 3e-62
Hit Clone Code (BAC ID) F2N1
Hit Gene Code At4g01160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BTB/POZ/Kelch-associated protein
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit BX659535 [GenBank] BX659534 [GenBank] BX659534 [GenBank]


Last Updated on 10.06.2021 13:37