SimpleSearch - Line and FST details
Line specific information
Line ID | 659E10 |
Vector Used | pGABI1 |
Line Availability | available as T3 set from NASC (N463226) |
Segregation Analysis | 50:50:40 |
Confirmed for Hit | At3g18550 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g18550
Sequence (A. th genome BLAST matches underlined) | >77-K021151-022-659-E10-8409 AGCCATTTACATTGACATGAAAACAAGAAAATTAGAAAGAGAGATTTCTTTTTTTCCTTA GCCTGCAAAATCAAGAAAAAAAAAGAGCAGTAATAGTGATTAGTCAGATAGTATGGGATC CTCCCTATAGTGAGANNNNNNGGGATCCTCCCTAT |
GenBank Accession | BX660824 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:6383582 - go to primer design |
BLAST e Value | 3e-19 |
Hit Clone Code (BAC ID) | K24M9 |
Hit Gene Code | At3g18550 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | TCP family transcription factor |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit MDK4
Sequence (A. th genome BLAST matches underlined) | >77-K021135-022-659-E10-8409 TGTATGCGGATCCTTTCTATAGAGAGATTTCTTTTTTTCCTTACCCTGCTAAATCAAGAA AAAAAAAGAGCCGTAATAGTGATTAGTCAGATGGTATGGGATCCTCCCTATAGTGAGAAT CCCACCATTTTCTATCAATTTGTTATTTGGGCTTTCGTTTGCATTTTTTGTTAGTTTTAG GATAAGGGTGGGAGTTTGTTTATGTTTATTATGTGTCTTTAAAATTTGTATTGCTATTAT C |
GenBank Accession | FR814228 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:22010815 - go to primer design |
BLAST e Value | 2e-13 |
Hit Clone Code (BAC ID) | MDK4 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |