SimpleSearch - Line and FST details


Line specific information

 
Line ID 695G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N466703)
Segregation Analysis 50:48:48
Confirmed for Hit At1g63940
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g20070

 
Sequence (A. th genome BLAST matches underlined)
>55-K024553-022-695-G07-8409
ACTGTGATAGACATGTACTTCACTCTCCTTCCTTGCGCGCTAGAGAGAAATAAGTACGAA
CCCTACCCTCTGATTGATAAAGCTTTGTTAGTGACTTGAAATCTATGGGATCCTCCCTAT
ACTGAGCTATAGTGAGCCTCGTGCTTTTGCGTGTGTGACCGCTTCCCTTTGTTCGGGTGC
GGGCTCTTGCTGCTCAGAGTCCCGTTGACAATAGTCTACCTTAGTTGTACTTTTGTACCG
GAAATCAGCCGCAACGATTACCTTCCCAGATTATTTCCCGGCACTTTAATCCTCTCCCTA
TGGAGTGGGTCCTAGCACTTTTTTGATAAAAGCTTCGAAGACCATCTATGGCATCCTCCC
TATAGTGAGAGACCGACGACGCCGATGACACTGATAAGTGGATTTTAATTCTATGGGATC
CTCCCTATAGTGAGTCTAATTCTGTCAATTTTTAGGA
GenBank Accession BX944182 [GenBank]
Graphic View Graphic view of gene At3g20070
Predicted Position of Insertion Chr3:7006462 - go to primer design
BLAST e Value 2e-10
Hit Clone Code (BAC ID) MAL21
Hit Gene Code At3g20070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation titan9
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g63940

Sequence (A. th genome BLAST matches underlined)
>55-K024558-022-695-G07-8409
CTTGTTTCAATAATTAAATCTAGAATTTGAGCTCTTCTTATAAACTAATGTCTGCAGGTC
TTCTTATCTCTCTCACTCACCACCATCTTCTTCCTCGATTGTCAAAACCCTATGGGATCC
TCCCTATAGTGAGACTATTGAATCCTCCCGATACTGAGACATTATCACATTACCTATTTC
AATTTCTAGAAAGTAAGACAATTCGTCGCGTACGAAACTTATTTTTAAGTTAAAATGGTA
CTTGCTCTGTGGCGATTACCAATTTATTCTCAGATGAAATCCTCTTAATCATAGACTTCA
AAGCGTGTGAATTAGTACTTCGATAGATATAGAAACTAAGTTGACCTAAATCAAT
GenBank Accession BX944183 [GenBank]
Graphic View Graphic view of gene At1g63940
Predicted Position of Insertion Chr1:23730026 - go to primer design
BLAST e Value 2e-47
Hit Clone Code (BAC ID) T12P18
Hit Gene Code At1g63940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation monodehydroascorbate reductase 6
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details