SimpleSearch - Line and FST details
Line specific information
Line ID | 695G07 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N466703) |
Segregation Analysis | 50:48:48 |
Confirmed for Hit | At1g63940 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At3g20070
Sequence (A. th genome BLAST matches underlined) | >55-K024553-022-695-G07-8409 ACTGTGATAGACATGTACTTCACTCTCCTTCCTTGCGCGCTAGAGAGAAATAAGTACGAA CCCTACCCTCTGATTGATAAAGCTTTGTTAGTGACTTGAAATCTATGGGATCCTCCCTAT ACTGAGCTATAGTGAGCCTCGTGCTTTTGCGTGTGTGACCGCTTCCCTTTGTTCGGGTGC GGGCTCTTGCTGCTCAGAGTCCCGTTGACAATAGTCTACCTTAGTTGTACTTTTGTACCG GAAATCAGCCGCAACGATTACCTTCCCAGATTATTTCCCGGCACTTTAATCCTCTCCCTA TGGAGTGGGTCCTAGCACTTTTTTGATAAAAGCTTCGAAGACCATCTATGGCATCCTCCC TATAGTGAGAGACCGACGACGCCGATGACACTGATAAGTGGATTTTAATTCTATGGGATC CTCCCTATAGTGAGTCTAATTCTGTCAATTTTTAGGA |
GenBank Accession | BX944182 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:7006462 - go to primer design |
BLAST e Value | 2e-10 |
Hit Clone Code (BAC ID) | MAL21 |
Hit Gene Code | At3g20070 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | titan9 |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Gene hit At1g63940
Sequence (A. th genome BLAST matches underlined) | >55-K024558-022-695-G07-8409 CTTGTTTCAATAATTAAATCTAGAATTTGAGCTCTTCTTATAAACTAATGTCTGCAGGTC TTCTTATCTCTCTCACTCACCACCATCTTCTTCCTCGATTGTCAAAACCCTATGGGATCC TCCCTATAGTGAGACTATTGAATCCTCCCGATACTGAGACATTATCACATTACCTATTTC AATTTCTAGAAAGTAAGACAATTCGTCGCGTACGAAACTTATTTTTAAGTTAAAATGGTA CTTGCTCTGTGGCGATTACCAATTTATTCTCAGATGAAATCCTCTTAATCATAGACTTCA AAGCGTGTGAATTAGTACTTCGATAGATATAGAAACTAAGTTGACCTAAATCAAT |
GenBank Accession | BX944183 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:23730026 - go to primer design |
BLAST e Value | 2e-47 |
Hit Clone Code (BAC ID) | T12P18 |
Hit Gene Code | At1g63940 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | monodehydroascorbate reductase 6 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |