SimpleSearch - Line and FST details


Line specific information

 
Line ID 710H08
Vector Used pGABI1
Line Availability available as T3 set from NASC (N468156)
Segregation Analysis 50:48:47
Confirmed for Hit At4g20930
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F2G19

 
Sequence (A. th genome BLAST matches underlined)
>64-K022876-022-710-H08-8409
GTCATAATCCGGAATNAGCCATTTACATTGAATATATCCTGAGAAGAAAAGAGAACATTT
CACTTGGGCTTACACAGATCGGAATATTTTTATCGACAAAATGACAACTTTGCCCTCTTT
CTTCCTTTCTTCTTCACATCTTGTCTTCGTTCATCTGTTTTTTTTTCAAAAAATTTATTG
ATCTTCTTCTACCTTTTGAATCCTATCGATCCAATTAACTGGTTTTTGATAAAAAAAATC
TAAACCCTAAGGGGATGATGTGTAGGAAACCCAAGGATTCCAATTTTAAACACATTAAAT
CAATTACATGTTTAAAAATTCAATTGAATCAACCTCTTCAATTATCATCAAAATCGAATA
AATCCTAAATCATCTTCATCAAAACTGCATATAAAGATCCAAACTACCACTTTTGCTTTT
CATTGTTGCTCAAGTCACCATTATCGCTGAAACTACTCACCATGAATGGTAATCGGAACC
CGACATATTGCCGTCTTTTTCATCCATCTCGCTACACCCCTAGACATGAATCATGACCCA
CCCCCCTCGGATCTCAATG
GenBank Accession BX663135 [GenBank]
Graphic View Graphic view of sequence BX663135 of line 710H08
Predicted Position of Insertion Chr1:17279027 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F2G19
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g20930

Sequence (A. th genome BLAST matches underlined)
>64-K023050-022-710-H08-8409
GAGCCATTTACATTGAATATATCCTGGTCGACATGGACATCAACAAATACTTGAATAAAA
CTGACAGTATGGGATCCTCCCTATAATGAGGTCTATCGTATAATGTGTATACCGATTTCG
TGTCTGGGTCGCTCCACCGGTTCTCTTCTTCGTCTCAAAATTCAAATCAATTCCAGGTTC
TGCTTTTTAATTGTCTTCATGATGAGAAAACATAATCTCTTTTCCTCATAAGTCACCTAG
AATTTTATTGAAACGCTCTAACAACTGATCCTTAACGTAGCTGGA
GenBank Accession BX663136 [GenBank]
Graphic View Graphic view of gene At4g20930
Predicted Position of Insertion Chr4:11201059 - go to primer design
BLAST e Value 3e-71
Hit Clone Code (BAC ID) T13K14
Hit Gene Code At4g20930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 6-phosphogluconate dehydrogenase family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details