SimpleSearch - Line and FST details


Line specific information

 
Line ID 815B08
Vector Used pAC106
Line Availability available as T3 set from NASC (N478164)
Segregation Analysis 50:27:15
Confirmed for Hit At4g16150
Parent of DUPLO pair 2316
Parent of pair(s) none

Gene hit At4g16150

Sequence (A. th genome BLAST matches underlined)
>58-K025643-022-815-B08-8409
NNNNNGGTCGTATCCGGACATNAGCCATTTACATTGAATATATCCAGTATGAACTGCATT
ACACGTATTAAGGACACCCGAGCTGGAATCTTCTACTACAATTTTATGAGAGAAGTGGTC
CGTGATCTAACTTGAGTATGGGATCCTCCCTATTCTGAGCAGTGATGGATAAAAGTATTT
TGTTTCGTATGGGATCCTCCCTATAGTGAGANTNNNNNNNATGGNGTTGNGNGNNAANNN
NNNNATNNGTGNGATNNNNNGANGNANNGGGNAGGGGGGNAANAGGATTGGAAAGTATTT
GAANGNAAGTATGGGATNNTNTNTATAGTGAGANANNTAGAGTTTAAGGNTTTTTTANTT
TAATTTGATGATAGGTATATAGTTATGTGNAATGANAAATTGAATATTTGANGTNAAANT
TATTGNAATGAATNNTTTTGATTTTTGTGTTTTAATTTATGATAGTAATATA
GenBank Accession CR399110 [GenBank]
Graphic View Graphic view of gene At4g16150
Predicted Position of Insertion Chr4:9149742 - go to primer design
BLAST e Value 4e-12
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g16150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation calmodulin-binding transcription activator 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details