SimpleSearch - Line and FST details


Line specific information

 
Line ID 838F01
Vector Used pAC106
Line Availability available as T3 set from NASC (N480413)
Segregation Analysis 50:43:42
Confirmed for Hit At2g16910 At1g22340
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g16910

Sequence (A. th genome BLAST matches underlined)
>38-K122735-0022-838-F01C-3144
CTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCC
GGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTAAATTGTAAATGGC
TTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAA
GAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTAT
AAAATGAAAGTACATTTTGCAATGGATATCGAAGTTGATTATCAACACTATGATGATCAC
CAGCATCACAATGGTCATCATCACCCATTTGATCACCAGATGAATCAGAGCGCTCATCAT
CATCACCACCACCAACACATCAACCATTACCACAACCAATAAG
GenBank Accession LT615071 [GenBank]
Graphic View Graphic view of gene At2g16910
Predicted Position of Insertion Chr2:7333945 - go to primer design
BLAST e Value 4e-70
Hit Clone Code (BAC ID) F12A24
Hit Gene Code At2g16910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details