SimpleSearch - Line and FST details
Line specific information
Line ID | 838F01 |
Vector Used | pAC106 |
Line Availability | available as T3 set from NASC (N480413) |
Segregation Analysis | 50:43:42 |
Confirmed for Hit | At2g16910 At1g22340 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g16910
Sequence (A. th genome BLAST matches underlined) | >38-K122735-0022-838-F01C-3144 CTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCC GGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTAAATTGTAAATGGC TTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAA GAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTAT AAAATGAAAGTACATTTTGCAATGGATATCGAAGTTGATTATCAACACTATGATGATCAC CAGCATCACAATGGTCATCATCACCCATTTGATCACCAGATGAATCAGAGCGCTCATCAT CATCACCACCACCAACACATCAACCATTACCACAACCAATAAG |
GenBank Accession | LT615071 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:7333945 - go to primer design |
BLAST e Value | 4e-70 |
Hit Clone Code (BAC ID) | F12A24 |
Hit Gene Code | At2g16910 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |