SimpleSearch - Line and FST details


Line specific information

 
Line ID 869F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N483397)
Segregation Analysis 50:19:12
Confirmed for Hit At1g73670
Parent of DUPLO pair none
Parent of pair(s) 1152, 84323, 84328

Gene hit At1g73670

 
Sequence (A. th genome BLAST matches underlined) 
>70-K026082-022-869-F09-8409
ATATAAATCCCTAGGTGATGAACATATCTCCATTATAAACCCGTATGGGATCCTCCCTAT
AGTGAGATACTACGAGATATTTCTGCTATTTCGTAGACGAACGCATGCTATCCTCCTTAG
ATTGAGTAGGATTATGTTGCTACTCGGTAGTATGGAATCCTCCCTATGGTGAGGCNCNGG
AGTNNAATCNTCATTATCTTTGGTANCCTGATGAAAATCANATTCCGTCAACTCNNAGAC
AACATAAACATCACGATCCTCTCTTCGAGAAGGAGGAATCTTATTATGTTCATTCTCTAT
CACATCTGGATGAATTATACATGTGATATTTTCTTAGTCGCCCTATGAGTCTTGGTTTAA
TTTTAGATATGATCTTTTATNTTTTTAATCTTTTTGATAGCAACCCACATATTTTTTTTT
TTACTAGTATATTGATGTCATATTAGTTTTAAT
GenBank Accession FR816887 [GenBank]
Graphic View Graphic view of gene At1g73670
Predicted Position of Insertion Chr1:27701032 - go to primer design
BLAST e Value 7e-23
Hit Clone Code (BAC ID) F25P22
Hit Gene Code At1g73670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MAP kinase 15
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit MHF15

 
Sequence (A. th genome BLAST matches underlined) 
>70-K026114-022-869-F09-8409
ATACTACTGGTTATATATGCTATTTCGTAGACGAATGTATGGGATCCTCCCTAGAGTGAG
TANGATTATGTTGCTACTCGGTGGTATGGGATCCTCCCTATAGTGAGAGGGGGGGGGGG
GenBank Accession CR404253 [GenBank]
Graphic View Graphic view of sequence CR404253 of line 869F09
Predicted Position of Insertion Chr5:1910930 - go to primer design
BLAST e Value 3e-06
Hit Clone Code (BAC ID) MHF15
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37