DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_055597c
Line Availability available from NASC (N684054) and ABRC (SALK_055597c)
Confirmed for Hit At2g13820
Parent of DUPLO pair 8028
Parent of pair(s) none

Gene hit At2g13820

 
Sequence (A. th genome BLAST matches underlined)
ACATGTTACAAAGGACATTTACGTAATTACACGTGTTCTCCAACATATTTCCGACAAGAT
ACTGTGACTCAAGGTTAGTTTGTACANTTCTTTTCAAATCTATAGTCATTTATTATAAAT
ACTCTTTTTTAAAAGAAAAAATTGTTTCTATGTATATAAAAAATATAAAAATTTAATTGA
AATTTATCAGTTAAAATTTTATGTTTTTAATAGCTAGAATAAGATTCAAACATATCTNTT
GAATAGATTGTATAGCCAGATTTTATGCCATTTAACCAAACCTAATTAAAAACGATGGGG
NNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAA
GenBank Accession CC054260 [GenBank]
Graphic View Graphic view of gene At2g13820
Predicted Position of Insertion Chr2:5775332 - go to primer design
BLAST e Value 6e-50
Hit Clone Code (BAC ID) F13J11
Hit Gene Code At2g13820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37