DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_089894c
Line Availability available from NASC (N663275) and ABRC (SALK_089894c)
Confirmed for Hit At5g16070
Parent of DUPLO pair 2254
Parent of pair(s) none

Gene hit At5g16070

 
Sequence (A. th genome BLAST matches underlined) 
ATTGCGGAGAAACATAAAGCAATGTTAACAAAAAAACTTCAAGATATATAAGGTACTTAC
TAACACAACACACTCGTCTTCTATGGTGTTCTTGACCGATCTCAGACCATCACGAACAGC
GTCCTTAATTTGGGCAATAGTGTGATCATTAGGCCCTACAAAACCCAAGAAATTCATGAA
TGAACACTAAAACTACTAAAAGAACAAATGAACCATCAAAACTTAATGAAGACATAAAAG
TCGTCCTAATACCTTTTATGAGGATGGTACATGAATTAGGATTCTTCACTTGCTCCACAA
AGGTGTACTTTTCCTCCCCAAGAACGTGCTCATAGACAAGTCCAGCCCATCCAAGAGACT
CAGGGGTCAAGTCGTCAACAGAATT
GenBank Accession ED598453 [GenBank]
Graphic View Graphic view of gene At5g16070
Predicted Position of Insertion Chr5:5248309 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F1N13
Hit Gene Code At5g16070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TCP-1/cpn60 chaperonin family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37