SimpleSearch - Line and FST details


Line specific information

 
Line ID 101D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N409643)
Segregation Analysis 100:100:85
Confirmed for Hit At5g04880
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g04880

 
Sequence (A. th genome BLAST matches underlined) 
>52-012072-strizhov-D7-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGAATGG
CTTCTTGTCCGGGAAACATCAATTGGAATGGGTAATTCTTGTGTTGGACCAAGCAGAAAT
GGCTTCTTGCAATCTGTTTCATCTGCAATGTGGCGGCCAAGAGATGGAGATGATTCGGCT
TCCATGAGTAATGGAGATATTGCAAGTGAAGCTGTTTCGGGAGAGCTTCGATCTCGATTA
TCTGATGAAGTCCATAATAAACCTCCTGAACAGGTCACAATGCCGAAGCCAGGGACTGAC
GTCGAGACCAAGGACAGAGAGATTCGAACTGAAAGCAAGCCTGAAACGCTATGGGATCCT
CCCTATAGTGAGTCGATTTACTCACACAATAAAGTGACAGATAGCTGGGCAATGGAATCC
GAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGA
GACTGTATCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACCAA
GATTTTCTTCTTGGCCTTGAGTCGGAAGAGACTTTGTATGAACTGTTCCCCAGTCTTTAC
GGCGAGTTCTGGTAAGGTCCCTTTTTGAATCTTTTGCTCCCTGGGAATTGGGGGATCCTC
TA
GenBank Accession BX942869 [GenBank]
Graphic View Graphic view of gene At5g04880
Predicted Position of Insertion Chr5:1419906 - go to primer design
BLAST e Value 5e-142
Hit Clone Code (BAC ID) MUK11
Hit Gene Code At5g04880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Other FSTs Supporting this Hit CU589298 [GenBank] CU589298 [GenBank] CU589297 [GenBank] BX942869 [GenBank]


Last Updated on 10.06.2021 13:37