SimpleSearch - Line and FST details


Line specific information

 
Line ID 135A08
Vector Used pAC161
Line Availability only available from NASC (N412872)
Segregation Analysis 50:30:19
Confirmed for Hit At5g59670
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g59670

 
Sequence (A. th genome BLAST matches underlined)
>57-K012755-022-135-A08-8409
CATCTTGATCCATGTAGATCTTCTCTGTACATGAAGCCTTTACACTTGAATACATGACCC
ACAAGGTTTTACATATCGTGTTTGTTCTATATACATCTATGTGTAGAAACATTTTGGTTA
TAAGAAAGAAGTGCACTGGTTTTAATGTCTGTTAACAGGGTTCATCAATTTGGATTGCGG
GCTACCCGCAAATGAGACGTCTCCTTATACAGAGACTCAAACTGGTCTGTTGTTCTCTTC
GGACGCAACATTCATCCAGAGCGGAAAAACTGGTAGAGTCCAAGCAAATCAAGAGAGTAA
ATTCTTGAAGCCATACAGAACGCTGATATATTTCCCAGAGGGAGTACGGTATTGCTACAA
TCTGAGTGTGTTCAAGGAGCGTAAATATTTGATCGCTGCTATGGGATCCTCCCTATAGTG
GCGNNTTTNCCCTACATNNGGAGGCTGGCGGATATGACCATTTGGAGTATAGACTCATGA
GACGCTCCACCTTGTGGACCAGGATTTTACATTTGTGTGGGGCTCACACGAGACTCCGAA
TATACTGTGTCTGCGACTATACGGTGAGAGACTCTGAGTCCTCTGATACACTGTCTGACT
GCTAGGTATGGTGGATCCTCTATGCGATTCTGCCTTTCTTGGATGTGGGGCTTCCTTGGA
GAGAGCCATCTATTTGGACTCCCCCTTAAAGGGGCGTTAACCCCANNNNTTGCGGGGGCC
CCGAGCCCGGTAAAACGGTAAATAAAATGAAAAGGCTTTTTTCGGAAAAAAGGTGTAACC
CGGGGGTTTTGGGCACATGGGAGAAACAAACGGGGGGCCGGTTTTTTTATAAAAGGGGAG
TGCCCGGATTTTAATAGNNGGGGGGGTTTGTGGGGCATTTGGGNAAAAGAAGGAGGCCCC
CTCTTTTATAAAAAGAAAAA
GenBank Accession AL765111 [GenBank]
Graphic View Graphic view of gene At5g59670
Predicted Position of Insertion Chr5:24041607 - go to primer design
BLAST e Value 1e-179
Hit Clone Code (BAC ID) MTH12
Hit Gene Code At5g59670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL765111 [GenBank]


Last Updated on 31.08.2016 09:40