SimpleSearch - Line and FST details
Line specific information
Line ID | 151C05 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N414429) |
Segregation Analysis | 150:57:55 |
Confirmed for Hit | At5g52545 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Note |
Gene hit At3g11770
Sequence (A. th genome BLAST matches underlined) | >35-K013138-022-151-C05-8409 TTTTGATCCATTGTAGATTTCCCTGGACATGAANGCCTTTACAATTGAATATATCCTGCC ATTGATCCATCTAATGATCGTCTTGAAGCTGCTGCCATTGAAGGTTGGCTTATTTTCAAT GTCTACGATCAATTGCAGCAGTGATTTTTCGTGGCAGTGTTCTTCATGTAACTCTTATGT TAACCTTCTTGATCTAATGGATTTGTGAGATTGCGCTTGATTGCGCTTGATTGATTCATG TTGTGTATTGTGATGAGTGAACAATACTGTCTGAATAAAACATGCCCGGCCTTGTCTTTT TGTCTGAAGATTTTGAGATTATGGTACAATGCCAAAATTTTAAGCTGTAAAAACATAATG AACCAAAAAGAGACAGCGAAATAGAACGAGCAAAAATGTAAATTCCTTGGATAGTTAGAT ACAAACTGGTTTAACTCTAAATCACATTCACAAGTTAGTTACAAAACTTACAAGAAACTC AACAAAACGTTAGCAACTCTGCCTATGGGATCTC |
GenBank Accession | AL757645 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:3721564 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | F26K24 |
Hit Gene Code | At3g11770 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
Insertion Classification | CDSi |
Confirmation Status | failed |
Gene hit At5g52545
Sequence (A. th genome BLAST matches underlined) | >35-K013133-022-151-C05-8409 TTGATCCATGTAGATTTCCCNGACATGCAAGCCTCTACTGTTATACACAAGATTCTTGCG ATCTAATATCTCTGGCTCCAAGGAACTCAACAGGTTGCAGATCCTCGGGCTTTCGCAGCT ATGGGATCCTCCTTATAGTGACAATGTACAGCTCTGGGTTCCCAATGTACGTGCTATCCA GCNAGAAAGAGACCTTTTCTACCTTTATCCCCTGCTATGGGATCCTCCTAAAATGACTTT TTCGTCTCGGCTCATTTGTCCTGAGCTGCTCCCGTTTACAAATCTGGTTCTGTTTCCTTC TGGTAATGATCTTTTGGAGTGATCATGAGAGGAATCTTCTATGGGATCCT |
GenBank Accession | AL757644 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:21323855 - go to primer design |
BLAST e Value | 4e-53 |
Hit Clone Code (BAC ID) | T4M5 |
Hit Gene Code | At5g52545 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RNA-binding protein-like RNA recognition motif protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |