SimpleSearch - Line and FST details


Line specific information

 
Line ID 219F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N420989)
Segregation Analysis 100:83:68
Confirmed for Hit At2g27220
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g27220

 
Sequence (A. th genome BLAST matches underlined) 
>06-K014202-022-219-F01-8409
CTGATCCATGTAGATTTCCCGGNACATGAAGCCTTTACAACTTCTGATAATCGAAATCAA
TTACCTGACTCTTAGTAAGGCCAGTCTGTTTGGCAAGCATTACCTTATCACAAATCCCTC
GGATATCTATACAAACCAAAACAAGACACAACTAAATCATTAGCATGCATGTCTATACAA
AACTAAGTAATGATCCTATGGGATCCTCCCTATAGTGAAGAAATGGCAACAACGCTGCGC
AAACTATTAACTGGCGAACTACTTACCCTATGGGATCCTCCCTATAGTGAGANNNGNCGC
NNCCCGCGCGGGGGGAAGCGGTCACCACCGTAGAGACCCGCCCCACGGGGGGGGGGGGGG
CAAAAAAAGCGGGGGGGGGGGGGGGGGGCCACCGACACAGACGGGGGTAGTGGCGAAAAA
ACGCGCAAGGTCGGGGGCAGGGACGCGCCCGCGGGCCCGCGCACGCACGGGAAAAAAACC
GGAAGGAGTGAAAACCGGGGGGGGGGGGGGGGAACAGGGAAAAACAGAGGGGGGGCAGCC
GGGGGGCGCGCAAATCGGGGGCCGCGCAACAGCGCGGCCCCCCGCGCGCCGGGCGGCCCG
GGGGGCGGGCAAGGGGGGCGCGCCCCGCCCCCCCGGCCGGCGGCCGCCCGCGCCCCACGG
GCGAGGAGGACGGACCCCCACGGGTGACGGCGGGGCCGCGAGGGGGGCGCCGAGAGGGGG
CAACGGCCGTGGGCGGCGCCAGGGGGGGGCAGGAGAACCCGGGGGGAGAGCGGGGGCCAA
ACGCGGGGGCGCGGGGGCGGCAGAGGCGGGCCGCGAGGGGCGCGGGACGCCCGGTGGATA
GGGCGCGTAGCGCGCGGCGGCGCGTGAACGGGCGTACGGGGAGGCGGGACGGGAGATAGC
CAGGAGGCCACAA
GenBank Accession AL767479 [GenBank]
Graphic View Graphic view of gene At2g27220
Predicted Position of Insertion Chr2:11638273 - go to primer design
BLAST e Value 4e-81
Hit Clone Code (BAC ID) T22O13
Hit Gene Code At2g27220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BEL1-like homeodomain 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37