SimpleSearch - Line and FST details


Line specific information

 
Line ID 323E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N430966)
Segregation Analysis 50:46:35
Confirmed for Hit At1g54210
Parent of DUPLO pair 12898
Parent of pair(s) none

Gene hit At1g54210

 
Sequence (A. th genome BLAST matches underlined) 
>45-K015947-022-323-E06-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATAGCCATGTAGTCTCTGTT
CCAATAGATGCTGGCTCTAAGCCACAAGAGCAAAAGGTCTCTGTCAAAATTTTGCTTCAT
TCTATGGGATCCTGCCCTATAGTGAGATCCCAATGGACGGGGTGCGGGTCTCTATGTGCG
GATTGGGGCTCCCAGTGTACGTGCTATCCACAGGAAAGACACCTCTTCGACCGGTTTCCC
CTGCTAAGAGAGCCTCCCTATAGTGAGAACATTGCTCTTTTGTATGTAAATTGGTCTATG
TGAATAGAGCTTTCTCGCCAAACCCGGATGAATCAGTCATTGATCTGTATAATGAAAGCC
TTTGGTTGTTTATCACTGCTTGTGCACAAGTACCTTTTGAATTTGTCTTCTTATTGCTTA
CATGGTGCTGGTTTGGTATGTGTAGAACTTTGGATTTGATGGTAAACTGGTGGTTAACTA
TGCTTGTTCCATGGCATGGGGCTAAAACTGAAGACTACAGAATTCTCAAAGCTGTGTAAG
CACATTATTTTCTTTTTCTGTTACTCTCTTTCTTCTCTGGTAAAGATAATCTACAAAACT
TTGATGTGATGTGTTCTCCTATTGAACTTCAACTGAACTTTCTATGGGATC
GenBank Accession AL949792 [GenBank]
Graphic View Graphic view of gene At1g54210
Predicted Position of Insertion Chr1:20241574 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F20D21
Hit Gene Code At1g54210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ubiquitin-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807894 [GenBank]


Last Updated on 10.06.2021 13:37