SimpleSearch - Line and FST details
Line specific information
Line ID | 379A05 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N436293) |
Segregation Analysis | 100:95:76 |
Confirmed for Hit | At1g32080 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit T10O24
Sequence (A. th genome BLAST matches underlined) | >33-K017231-022-379-A05-8409 TGTCCTACCTATAGAATTATCAAAGTCATAGATATTTTGGCTGACTTTGGAGATCTGCAT CGTTCAAGAACATATAGTTTACGTACATAAGCTATGGGATCCTCCCTATAGTGAGANGNN NTNNANACNTGNNTNNNANGNNAGTTTTTTCTACNATACTCTTTGTGGGAGGGGGTACAC TCTATGGGACCACTACCGGAGGAGTGCGATCTTTGACGATGGGATGTCTTTTATAACAAT GTTGTCATACTGAGGGAGTGCCCTACCTCTACTTCTCATATCGCTGAAAAGTGACACATA AGTCTGCTATCGGATCACCCGTGCCTTGAACAAGATACACCTTTATTTATGACCTTCCTA AGAGATTGCGTATTTTTCATCTGGCTATGGGAACCTCCGTGTAGTAAGATAGTGAGCGGC TCTCTCTTGTTGACAAAAAGTCCCTCCATATAGCGAGGGAGCGGATCCCCCTGTGTAACC AGTTAACCCGCGGTTGAACCCGACATGTGTTTTGGGCCCCCAGGGAACATGTGGCCCCCC AGGGGATACCGGCCCTTTCTCTGGGGAGACCCCGCATCATGGGGAGGACAGCAAAAGGGA AAAGCCAAAAACTGGACCAACAAAGGAAAGGAGAAGAAAA |
GenBank Accession | BX004298 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:3446730 - go to primer design |
BLAST e Value | 2e-33 |
Hit Clone Code (BAC ID) | T10O24 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At1g32080
Sequence (A. th genome BLAST matches underlined) | >33-K017221-022-379-A05-8409 TATACTATGATTTCCTCGACATGAAGCATTTACTCTTGAATATATCCTGGCCATATGAAA TTACATTTCGTTTGGTTAATTATATTCATTTTTGTTTAGTCTATATTTTCAAAAGTGACA ATTACGATATCCATTTTGATTGAAAAGTGTTCAGGGCTTTGGTTGGGTTTAACTGTCCGA CCCTATGGGATCCTCCNCTATAGTGAGATAATATTAATATAGTTTTTGATACATCTTTTT TATTANAGTATTTTCTAACGTAACTTTTATCATATCCAATAAACCAAATTTTACAATTAC AATAGGCTTGAAAGATGACAATAAATTAAATCTTCGAATATATTTTCATACAAGTGAATG ACACTAACACCAATTTCCTAACCTTTAAAACCGAAACCAAAGTCAGCTAACAAATAACCT AAACCTATGGGATCCTCCCTATAGTGAG |
GenBank Accession | BX004297 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:11539811 - go to primer design |
BLAST e Value | 1e-118 |
Hit Clone Code (BAC ID) | T12O21 |
Hit Gene Code | At1g32080 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | membrane protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |