SimpleSearch - Line and FST details


Line specific information

 
Line ID 511A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N448963)
Segregation Analysis 50:39:31
Confirmed for Hit At1g01080
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g01080

 
Sequence (A. th genome BLAST matches underlined) 
>17-K021258-022-511-A03-8409
TGTTGTTTTATATGAAATAAGCTGAGGTCCCAAGCTATAAATGCGAAAACAGAAAATTAG
TTCAGGCATTTTCTTTGCTTCAGTGCTCTTATTCCCTTTACCGACACTTTAATTATAAAG
AAAGTAGGAGACCTGAAATTATAACCCAGTGGCGGGCGGGTCTAATGGACCCATTCATCC
CTCAATCTTCATTCGAACCACTACATCACAACTCCTTGGCTCTGAGGGAAGGTGGTAGTG
ATAGAATCTGCTATGTTTGAACTCCCTCGAGGTTTGAAGCTATATTTTGACCCAATGATC
GTTATGCAAACCACAACACTGTCTTCTTTGATCTTACTATGAAGAAGTCTGCAAATCTTG
AGGTTTAAAGCTATATTATAAGCAAGCTATGCAGAGATGAAGCAAAGAGGAAAAGAGTTT
TCTGTGCTGTGGAAGCTGTATTGGCATGTATTGTTCTTATACGAGATTGTGTGTAATTG
GenBank Accession BX649822 [GenBank]
Graphic View Graphic view of gene At1g01080
Predicted Position of Insertion Chr1:46935 - go to primer design
BLAST e Value 1e-160
Hit Clone Code (BAC ID) T25K16
Hit Gene Code At1g01080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding (RRM/RBD/RNP motifs) family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX534634 [GenBank] BX649823 [GenBank] BX649823 [GenBank]


Last Updated on 10.06.2021 13:37