SimpleSearch - Line and FST details
Line specific information
Line ID | 715A09 |
Vector Used | pGABI1 |
Line Availability | available as T3 set from NASC (N468553) |
Segregation Analysis | 50:49:38 |
Confirmed for Hit | At5g03580 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g03580
Sequence (A. th genome BLAST matches underlined) | >65-K025039-022-715-A09-8409 ATGAAGCCATTTACATTGAATATATCCTGGCAGAGGATGCCATTTATTACAGCCTTCATT GGTCGAACGATGTATGCGATACGATTGAGTACGCCGTGTATATTAATTGCCAGAACAGGG AGCAGAGCGTATAAGAGCCCTAGATCACTTATCTGGCAATTACTCAATCTGTATTATAGA GAGATATCGACCTTGTAGAGAAAGACGGGTGATCTCGACGGGCATGCATGTATGGGATCC TCCCTCTCGTCGGGCAGGAGCTGCAACGTTAGCGTATAGTATTTGAGGGCGCGTATGGCA CCCAAAAAATGTTGTGTCTGAGGTTTACGGATTTCGGAAAGGTTATAGAAATCAGTTCTA TACAAAGATTTTAGAGGAGAGTCGCGAGGAGTTGCTTTCATTGATTATGAAAGTGAGGAA ATCGCAGGACAAAGCTGGATTCCTATGAACGAATTGTTTAATACCCAAACCCATATGATG TTGCTGGTAGATTTCTAATAAATATCACGGCCAACATATAGTTATACTGGTTACCTAACC TACATTCTCTTCAGTTTTATAAT |
GenBank Accession | FR814935 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:907599 - go to primer design |
BLAST e Value | 2e-26 |
Hit Clone Code (BAC ID) | F12E4 |
Hit Gene Code | At5g03580 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RNA-binding (RRM/RBD/RNP motifs) family protein |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | FR814935 [GenBank] |
Last Updated on 10.06.2021 13:37 |