SimpleSearch - Line and FST details


Line specific information

 
Line ID 393A05
Vector Used pAC161
Line Availability only available from NASC (N437637)
Segregation Analysis 50:49:38
Confirmed for Hit At2g15830
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g15830

 
Sequence (A. th genome BLAST matches underlined)
>33-K018292-022-393-A05-8409
TTTCCCGGACTGAAGCCTTTACATTGAATATTCCATGGCATGCATGTTTGACTTTATATA
AATACCGAAGAAGATGGAGTAAGAATTTGACGGTAGAGACGAAGGAAAAAAAAGAAGCAA
AGCGATTGTATGTAGAGAAAGAATGAGAGGATGGTGATAAAGAAAATCGAGCTATGCATA
GAGATTACTAAAATCACATTGGAGTTCTTGGTGGTGGTGGCTGACGCCGCCACAATCTTC
TTAAGGCATTCTTCTCCACCTCCTCCGGCTCTACTCCGCCCTGGTCTCTACTCATACTCT
GCCTCCCCTAATCCTCCTTCTTCCCATTACATCATCGGCTTTCTTCCCAAAGTTTGTAAT
CGTTTCGCTTTAATGCTTCGTACATACTATACATATGTATATTCTTGCCTTGTTTTTTAT
AATGAATGGCCTGGAACATTGATTTCTTAATTTTCGAATAATGCGCCTCGCACCTTAATG
TCTCTAGAGATATGCTTATTTTCATCAACGAGAACAATGCTATCCGTCCCCATGGTTGAG
GCGGACTTTACGGCGAGTTCTGTTAAGGCCCTCTATTTGAATCTTTGACTCCGTGGGAAT
TGGGGATCCTCTAGCAAAATTAGCCAGGGCCTCTAGCGTTTTGTTTTATTTAGGACTCTG
CCTCTTATATGGATTCTCCACTGAATTTTTTATTCTTAGGGAAGGTTCAAATGGAAAATG
GGCCCATCGTACCATTTTCTGCTATGTAAGNGACTGTGGGAGGGGCTTTTGCCAATCAAA
CCACCTA
GenBank Accession BX286684 [GenBank]
Graphic View Graphic view of gene At2g15830
Predicted Position of Insertion Chr2:6894047 - go to primer design
BLAST e Value 3e-162
Hit Clone Code (BAC ID) F19G14
Hit Gene Code At2g15830 [TAIR] [MIPS] [SIGnAL]
Gene Annotation unknown protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 14.10.2014 10:23