Sequences from confirmation amplicon


Confirmation sequences for line 369C09 and hit T15N1 are shown.
Line ID 369C09
Locus T15N1 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:4739987
Primers used for PCR JZ46 - 8474, show primer details
   
Sequence Name 44-K037809-022-369-C09C-8409
GenBank Accession LN505105 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>44-K037809-022-369-C09C-8409
GCCATTTTGCATGTTTGGCATGAACCGGTTGCGTGTTGGACGAACTCATTATTCATATCA
TTACAATGTTGTTGTTTTTTTTGCTAAAGGTATCATTACAATGTTTGATTTATCAGAAAA
ATTATTGTGTATACTTTTCATGATGATTGACAAATTAAAATAAAAATTATATTTGTGATA
ATCCTTTTGCACCGGCCAGTCGGGCCAGAAACAAAATTACGTGTTGTTGAAATTGGCTTT
ATTTGCTCGTTATTGACTTATTGTTAGTTATCCGAAATAGGAAGAATTTATAAATTTTCC
ACGAACACCAACTCTACCGCCCTTTACAACAACCACCCTCCACGCAAACCACATTCGTAC
AATTACAAATAACAATGATTCTCATTTTTTTTATTTCATAATGATTTATCATTACACTAA
ACAAATAAATAAAGCATAATTTAAAAGAAGAAAAGAATAAGAGCAAAACGTT
   
Sequence Name 36-K037809-0022-369-C09C-JZ46
GenBank Accession LN502137 [GenBank]
Sequencing primer gene specific primer, JZ46: 5'-AAGCTATTGACGTAACGTTTTGCT-3'
Sequence (A. th genome BLAST matches underlined) 
>36-K037809-0022-369-C09C-JZ46
TCTTTATATGCTTTATTTATTTGTTTAGTGTAATGATAAATCATTATGAAATAAAACAAA
TGAGAATCATTGTTATTTGTAATTGTACGAATGTGGTTTGCGTGGAGGGTGGTTGTTGTA
AAGGGCGGTAGAGTTGGTGTTCGTGGAAAATTTATAAATTCTTCCTATTTCGGATAACTA
ACAATAAGTCAATAACGAGCAAATAAAGCCAATTTCAACAACACGTAATTTTGTTTCTGG
CCCGACTGGCCGGTGCAAAAGGATTATCACAAATATAATTTTTATTTTAATTTGTCAATC
ATCATGAAAAGTATACACAATAATTTTTCTGATAAATCAAACATTGTAATGATACCTTTA
GCAAAAAAAACAACAACATTGTAATGATATGAATAATGAGTTCGTCCAACACGCAACCGG
TTCATGCCAAACATGCAAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAG
TATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAA
TGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTAC
GATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTAT
TTCGACGTGTCTACATT

Last Updated on 06.12.2018 16:11