Sequences from confirmation amplicon


Confirmation sequences for line 038D03 and hit At1g47800 are shown.
Line ID 038D03
Locus At1g47800 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:17601711
Primers used for PCR 35mm - 8474, show primer details
   
Sequence Name 37-K114362-0022-038-D03C-35mm
GenBank Accession LN502703 [GenBank]
Sequencing primer gene specific primer, 35mm: 5'-CTTCTTCTCTTGTTGCTCCATCTT-3'
Sequence (A. th genome BLAST matches underlined) 
>37-K114362-0022-038-D03C-35mm
TATGCCTCTATACTTTTTTTTACTTATTATTAATATTTGAACATATATAAATAAAATGAT
CACTTTCCTCTCTTTTTTTTTTTTAAAAATGAAAATTCCCCCCCTTTTTTGGAAAAAAAG
GATAAGGGGCAAAATTTAATTTAACAAAAGGGTTTTTTTAAAAAAAAAAAATTTTTCCCC
AAAATTCCCCCCCTTGGTTTCCCTTTTAATTTAAAAACCATTAAGGGGTTCCAAAAACCC
GGGAATAAAAAAAATTTATAGGGGTTTAAAAAACCCAACAAAATTGGGCTGGGGGAAAAC
AAAAAAAAACCGCCATCCCCAAAATAAAATCCCAACCAAGGTGTTTTTAAAAACCCCCGG
AAATTTCCCGGCAAAACCGGAACCGGGGTTTTTTTGGGAACAAAGGGTGGGGCCCAAAAG
AACCCGGGGGGGGGTTTTCAAAAAACCCTTCAGTTTTAACTTTCCCCAAAAAAACCCCCC
CCCCCCCCGGGGGCTCCATTGGAAAAGGGCTCCGGGCCGGGAAATCCCCCGGGGATACCC
ATGGAGAAAAAGGGCAAAATGGGAAAAAAAAAAAAATAATTCCCCATTTTTTTTCCATTC
AAAAAAGGTAATTTCCCCCCCGATAAAAAAAA
   
Sequence Name 07-K114361-0022-038-D03C-8409
GenBank Accession LN489370 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>07-K114361-0022-038-D03C-8409
TTTCATTGAGCCACGGAGGCGAGGCTGCTTCTGTGGGGAAGAGTAAGACGTGAAGGATCT
GATGAATACCTCACCTCGGATCATTGTGGCCCATACCTTTGATACACAAAGAAACCTAGC
TACAGATTTCGCAGGTAACTTCACGAGGATCTCGAACAACACGTCGATCGGAATATGATC
TAGAGATTGCAGATTCTTCTCTGTCTCCGCCATGCCAACTCTGCTCGGTTTTTTCAAACC
CTAATAAATTCTTGTAATCCAAGGATATCAGAAACACATAAATGATATTAAAATAAAATG
GAAAACAAAGAGAGGAAATTTAGCGAAAATATATATATTTGTAAAATAAACCTTTTAGTA
ATATCAAATCTTGCCTATAATCATTTTATACAAAAAAAGGAAGGAAATCTCAATTATNAA
AAAAAAAAAAGGAGGGGAAGGGGACCTTTTTTTTTATTTTTTTCCAAATTTAAAAAAAAG
TTAAAAAAAGTTAGGGGGGCAACCATCCGGTATTTTCCTTTTTTAACGGAAAAATTTGGG
TTTTGCCCAAAGTGGGG

Last Updated on 06.12.2018 16:11