Sequences from confirmation amplicon


Confirmation sequences for line 088C01 and hit At4g36940 are shown.
Line ID 088C01
Locus At4g36940 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:17417963
Primers used for PCR 02ed - 8474, show primer details
   
Sequence Name 22-K110359-0022-088-C01C-02ed
GenBank Accession LN496159 [GenBank]
Sequencing primer gene specific primer, 02ed: 5'-TTACTCAGAATCGAAGGTCCTGTT-3'
Sequence (A. th genome BLAST matches underlined) 
>22-K110359-0022-088-C01C-02ed
CTCTACTCTCTAATTGGAATGATCAGTTTCTGATTCCTCTTGTGCTTCTTTACTTAGGTG
GTGCAATTGTTGGAAACTCCATTCCTCAATCTCATCAATTACGCATCTTTGGTTGCTACA
AATGCAGCAAGACATCGGTTTGTTGCAGGAAAATCTAAGCTTCTGCTTGAGTTTGGTGCT
AGAAGAGCTCAGGTTTGTTTCCCTCTCAAAACCTGTTCTATGTTTAGCCTTAGATGTTGA
GGTTTTGTTTGTTGCATCTCTGATATGCAATTGTTATAGGGACCCGATGGTGCAATAAGC
GCATCAAAGTATTGCTACCTTGGAGGTTTTGATGCAACAAGGTATGTCTTTACTAGTGAT
ATTTTTGTTTTGTTATGGAAACATCAAAAGGGAAGAGAGGATATGATTTTCTCATTTTGC
TTGCTTTGTTTATTACTGCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATC
TACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAA
TTTTTTTTCAATTCAAAAATGTAGATGTCCGC
   
Sequence Name 06-K110358-0022-088-C01C-8409
GenBank Accession LN488862 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>06-K110358-0022-088-C01C-8409
CATTTACATTGAATTATCCTGCAGTAATAAACAAAGCAAGCAAAATGAGATAATCATATC
CTCTCTTCCCTTTTGATGTTTCCATAACAAAATTAAAATATCACTAGTAAAGACATACCT
TGTTGCATCAAAACCTCCAAGGTAGCAATACTTTGATGCGCTTATTGCACCATCGGGTCC
CTATAACAATTGCATATCAGAGATGCAACAAACAAAACCTCAACATCTAAGGCTAAACAT
AGAACAGGTTTTGAGAGGGAAACAAACCTGAGCTCTTCTAGCACCAAACTCAAGCAGAAG
CTTAGATTTTCCTGCAACAAACCGATGTCTTGCTGCATTTGTAGCAACCAAAGATGCGTA
ATTGATGAGATTGAGGAATGGAGTTTCCAACAATTGCACCACCTAAGTAAAGAAGCACAA
GAGGAATCAGAAACTGATCATTCCAATTATGAGAGTTAGAGATAGATAATAAGAACTCAC
AGCAACAGGACCTTCGATTCTGAGT

Last Updated on 06.12.2018 16:11