Sequences from confirmation amplicon


Confirmation sequences for line 337A03 and hit At3g48440 are shown.
Line ID 337A03
Locus At3g48440 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:17942762
Primers used for PCR 08kn - 8474, show primer details
   
Sequence Name 58-K113756-0022-337-A03C-08kn
GenBank Accession LN509763 [GenBank]
Sequencing primer gene specific primer, 08kn: 5'-AGGGATCAAATCTGGTCACTTCTA-3'
Sequence (A. th genome BLAST matches underlined) 
>58-K113756-0022-337-A03C-08kn
CATTCAGAATTACAAGCATTAACTATCAAAAACTATCATTACAAATCCTGCAACTTTGTA
ATACTAGCATACAAGAACAGACAACAGAAGGTAAGAAAAGAACTTACAGGTCTAAGGGGT
AAACCCTTGTCATTGAGAGCATAAGGAGGCAGCTTCGGCAGACGATTCTTAGGATGGTGG
TATTTGCAATTGAATTTGAACTTGCAGTCCCCAGTTTTCATATAATAACTGCACTCAGGT
TGGTCTGGACGTTCTGGAAATTCTTCAGCAGGCATTTGATGTCGGTATTGTGACAGCAAC
ATACTTGTTTCAGCTGATGAATTGTTCATTAGGTATGTGGTGGAAGGAGAAAACACACCC
CTTTCAGATGAATACACAGAAGCCTACACAAATACGAAACACAAGATAAAGTCATCATAG
ATAACTCGAATAGAAATCAATTTTATTAAGATCCAGAGCTTGAAGTACATACTACCTGAT
AGCCATTCCACTCTGGATTTTGAGATGTAACCCCATGAGTTTGTGACAGCATGACTGGAA
TAAAAGGAGATGTACATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCA
GCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAA
TTCAAAAATGTAGATGTCCGCACCGNTTATTA
   
Sequence Name 20-K113755-0022-337-A03C-8409
GenBank Accession LN495292 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>20-K113755-0022-337-A03C-8409
TTTCATTGAATGTCATCTCCTTTTATTCCGTCATGCTGTCACACCTCATGGGGTTACATC
TCAAAATCCAGAGTGGAATGGCTATCAGGTAGTATGTACTTCAAGCTCTGGATCTTAATA
AAATTGATTTCTATTCGAGTTATCTATGATGACTTTATCTTGTGTTTCGTATTTGTGTAG
GCTTCTGTGTATTCATCTGAAAGGGGTGTGTTTTCTCCTTCCACCACATACCTAATGAAC
AATTCATCAGCTGAAACAAGTATGTTGCTGTCACAATACCGACATCAAATGCCTGCTGAA
GAATTTCCAGAACGTCCAGACCAACCTGAGTGCAGTTATTATATGAAAACTGGGGACTGC
AAGTTCAAATTCAATTGCAAATACCACCATCCTAAGAATCGTCTGCCGAAGCTGCCTCCT
TATGCTCTCAATGACAAGGGTTTACCCCTTAGACCTGTAAGTTCTTTTCTTACCTTCTGT
TGTCTGTTCTTGTATGCTAGTATTACAAAGTTGCAGGCTTTCTAATGATAGTTTTTGATA
GTTAATGCTTGTAATTCTTGAATGTTTGATGAACATTTTGACTCTTACATAGTGAATCAA
TCTAGAAGTGACCAGATNTGATCCCTA

Last Updated on 06.12.2018 16:11