Sequences from confirmation amplicon


Confirmation sequences for line 341D02 and hit At3g09690 are shown.
Line ID 341D02
Locus At3g09690 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:2972722
Primers used for PCR CT16 - 8474, show primer details
   
Sequence Name 55-K105356-0022-341-D02C-CT16
GenBank Accession LN508809 [GenBank]
Sequencing primer gene specific primer, CT16: 5'-TCTTTGCTCATAAGAACCCACTTT-3'
Sequence (A. th genome BLAST matches underlined) 
>55-K105356-0022-341-D02C-CT16
TCTTGTGCTCTGAGAGTTGGTCCTGACTTGGGATTTAGGGATTTCGTTTTGATAATGGAG
GAGATGCGAAGAGGAGTGCCTACGTGGCAAGACGAGTTAGCTAGTCTCATGGACGGAGGT
TTACAATACGACGGATCTCCGATTGATTTGACGGCGGATACTGAATCGAGGTCAAAGAGT
TCGGGTTTCGAGTCGGGTTCTGGATCCGAATCAGTGGAGAGTTTGAAAGATCAAGTGACG
GGGTTTATGAAGTCTTGGGGAGAAATGCTTATGGATCTCGCAATCGGATGCAAAGACGTT
GTGCAGCAGATGGTGGTGACCGACGACTCTTTCGTTGTAAGGAAGCTCCGGAAACCAGCT
GCTAAGGTTTCGAAGAAGCTTAGCTTCCTTAACGAGTACTTGCCTGAGGATCGTGATCCT
GAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGA
GTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAA
ATGTAGATGTCCGCAGCGNTTATTA
   
Sequence Name 39-K105357-0022-341-D02C-8409
GenBank Accession LN503350 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>39-K105357-0022-341-D02C-8409
GCCTTTACATTGAATATATCCTCAGGATCACGATCCTCAGGCAAGTACTCGTTAAGGAAG
CTAAGCTTCTTCGAAACCTTAGCAGCTGGTTTCCGGAGCTTCCTTACAACGAAAGAGTCG
TCGGTCACCACCATCTGCTGCACAACGTCTTTGCATCCGATTGCGAGATCCATAAGCATT
TCTCCCCAAGACTTCATAAACCCCGTCACTTGATCTTTCAAACTCTCCACTGATTCGGAT
CCAGAACCCGACTCGAAACCCGAACTCTTTGACCTCGATTCAGTATCCGCCGTCAAATCA
ATCGGAGATCCGTCGTATTGTAAACCTCCGTCCATGAGACTAGCTAACTCGTCTTGCCAC
GTAGGCACTCCTCTTCGCATCTCCTCCATTATCAAAACGAAATCCCTAAATCCCAAGTCA
GGACCAACTCTTCAGAGCAACAAGACGAAGAAGAAGAAGACCTGAACATACATTAAAGTG
GGTTCTTATGAGCAAAG

Last Updated on 06.12.2018 16:11