Sequences from confirmation amplicon


Confirmation sequences for line 347B02 and hit At5g38560 are shown.
Line ID 347B02
Locus At5g38560 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:15440582
Primers used for PCR RK62 - 8474, show primer details
   
Sequence Name 45-K018968-022-347-B02C-RK62
GenBank Accession LN505372 [GenBank]
Sequencing primer gene specific primer, RK62: 5'-CAAGACATTAAGCAAAATCAAGCA-3'
Sequence (A. th genome BLAST matches underlined) 
>45-K018968-022-347-B02C-RK62
GTCATGCTTCTTAAGCTTCTGAAACTAATCATACTACTCACAACACTCAATATATACTGT
AAAGAGAAGACACAGAAACCACACTGGCAGAACCAAATGCAGATTGATCAAGACATTAAC
AATACACATTATCCAAAACTTAGTGAGTGTTCCATGCTCATTAAGTTACTAAAACTAACC
ATACTACTCAGTACACAGTTCTTTCAACAGTTCTCGAACCGTTAATGAACAAACCAACTA
GGGTTTCTAACCGCACCCTAAATGCAAAAGGATCTTAGATTATCCAACTACAAAATGCCT
TTACAGAACCTGAGATGTATTCTTCTATGTTATATTACCTGAGCCTTGAGGAGATGAATA
AGCGGAAGGAGGCATTGTGTATCCAACAAAGGTTCCAGGGTCCTTTCGCTTTCGTTTCCG
AGTGAACCACACACCCATCACAAAAAGGCTAAGAAAAACCAAATGAAACTACATGTACAA
TCACAAACACTGATAGTTTAAACCTACATGTAGATTTCGGCAGGATATATTCAATTGTAA
ATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATA
   
Sequence Name 46-K018968-022-347-B02C-8409
GenBank Accession LN505720 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>46-K018968-022-347-B02C-8409
TAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCCGAAATCTACATGTA
GGTTTAAACTATCAGTGTTTGTGATTGTACATGTAGTTTCATTTGGTTTTTCTTAGCCTT
TTTGTGATGGGTGTGTGGTTCACTCGGAAACGAAAGCGAAAGGACCCTGGAACCTTTGTT
GGATACACAATGCCTCCTTCCGCTTATTCATCTCCTCAAGGCTCAGGTAATATAACATAG
AAGAATACATCTCAGGTTCTGTAAAGGCATTTTGTAGTTGGATAATCTAAGATCCTTTTG
CATTTAGGGTGCGGTTAGAAACCCTAGTTGGTTTGTTCATTAACGGTTCGAGAACTGTTG
AAAGAACTGTGTACTGAGTAGTATGGTTAGTTTTAGTAACTTAATGAGCATGGAACACTC
ACTAAGTTTTGGATAATGTGTATTGTTAATGTCTTGATCAATCTGCATTTGGTTCTGCCA
GTGTGGTTTCTGTGTCTTCTCTTTACAGTATATATTGAGTGTTGTGAGTAGTATGATTAG
TTTCAGAAGCTTAAGAAGCATGACACTCTCGCTGAGTTTTGACTGCTTGATTTTGC

Last Updated on 06.12.2018 16:11