Sequences from confirmation amplicon


Confirmation sequences for line 800A03 and hit At2g39420 are shown.
Line ID 800A03
Locus At2g39420 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:16460967
Primers used for PCR BA10 - 8474, show primer details
   
Sequence Name 80-K104767-0022-800-A03C-BA10
GenBank Accession LN513951 [GenBank]
Sequencing primer gene specific primer, BA10: 5'-TGGATATGAAAAGATGCATGAGAG-3'
Sequence (A. th genome BLAST matches underlined) 
>80-K104767-0022-800-A03C-BA10
ACCAGACAGCCCCATCCAAAACTGAGGCTTCTTTCTGTGTAACAACAAAAGCACTGCTCC
TCCCATTGATTCTCCTAACAAGAACCTCATCTTCCCTTTATTCTCTTCTTTCTCTAATTA
TTCCAACCACACACAATAATAAACAAACATCAGGCAATACTTTTTTGATAAAGTCAGACA
AAAGACACTCAATTATGTATGGGTTGCTTCCATCCAACAAAAAGCATCATGATGACATGA
TAGATAATTTCGAAAAGAAAATATTCTTTATTTGATCAAAATTATCTGAATGAGTAAAAA
AAAAAGCGGTTTTGACAGTGTCTTCAAAAGATATAGTCTAGGTCTAAAAAGTCAATATTT
CACTTTTAACCCCCACAAATAAAAGTCAACATTACCGCAAATGCTTGTGTAGTGAGTAGA
GACATCATCAACGAGATGGTCAAAGTTTGGGACATAAGCACTAAGCCCATCAAATTTTCC
ATTGTAAATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAA
TGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCA
AAAATGTAAATGTCCG
   
Sequence Name 80-K104768-0022-800-A03C-8409
GenBank Accession LN513952 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>80-K104768-0022-800-A03C-8409
TTACAATTGAATATATTTACAATGGAAAATCTGATGGGCTTAGTGCTTATGTCCCAAACT
TTGACCATCTCGTTGATGATGTCTCTACTCACTACACAAGCATTTGCGGTAATGTTGACT
TTTATTTGTGGGGGTTAAAAGTGAAATATTGACTTTTTAGACCTAGACTATATCTTTTGA
AGACACTGTCAAAACCGCTTTTTTTTTTACTCATTCAAATAATTTTGATCAAATAAAGAA
TATTTTCTTTTCGAAATTATCTATCAGGTCATCATGATGCTTTTTGTTGGATGGAAGCAA
CCCATACATAATTGAGTGTCTTTTGTCTGACTTTATCAAAAAAGTATTGCCTGATGTTTG
TTTATTATTGTGTGTGGTTGGAATAATTAGAGAAAGAAAAGAATAAAGGGAAAATGAGGT
TCTTGTTAGGAAAATCAATGGGAGGAGCAGTGCTTTTGTTGTTACACAAAAAGAACCCTC
ATTTTTGGGATGGGGCTGTCTTGGTTGCTCCAATGTGTAAGGTATATGTTCATTCTCTCA
GGCATCTTTTCATATCCAA

Last Updated on 06.12.2018 16:11