Sequences from confirmation amplicon


Confirmation sequences for line 948H02 and hit At3g26070 are shown.
Line ID 948H02
Locus At3g26070 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:9528181
Primers used for PCR 71lx - 8474, show primer details
   
Sequence Name 23-K114086-0022-948-H02C-71lx
GenBank Accession LN496645 [GenBank]
Sequencing primer gene specific primer, 71lx: 5'-ATGAGCTCCCATTTCCCA-3'
Sequence (A. th genome BLAST matches underlined) 
>23-K114086-0022-948-H02C-71lx
GGGTTACTGCTTCCCCTTACGTGCTACTATCATGATTCAAAACAAACACCACTCAGATTA
GTCTCTCAATCACATTCTCTATACCCTAGTGTACCAAAACTATTCTCAATGGTTCCCACA
TGAAGAGAAATCAAGAACCTGATCAATCAGAAGCTGATCATCAGGCGAGGCAGTGGCACC
ACGTTCAAGAGGCTCAATGGCTTCGACAAGTTCATGTTTGAGCTGTTTCCGCTTCTCGGC
TCCACCGTTTCTTGGAGGAAAGCTGAAAACAGCTTGGATTCTCAATCTTTCCCGATCACC
TTTTCGAATACTCAGTAACTTCGTCGGAACGGCGAAGCCACTGTCCGATGGATGATTAAA
TCCGGCGGCCGGAGACGTTAAAACTCCAGTCTTTAAGCACCAAGGTAAAGCCATGGATAT
CAAAACAGGACAAAGCTTTTCCAATGGAGTTTTAAAGAGTGGCTGGGTCGTTTCTGAGAG
ACTCTGTTCGAAGATAGACACATAAGAGAGGAAAAAGAGAGAGATCGTAGCTCTGTCTTC
GCCATGACCGACAACAACATCACACACACCACCGAAAGTCACAAAGATAAGGTTTTTTTG
CTCTCTTTTCTTCTAAAACGAGAGGCCCTAGTTGTTTCTGACTCATTACGGCGTCGAAAA
CGTATGTGGAAAAGTAGATCTTTGCTATTTTCTTCAAATTGTCAAAAAGGCTCTACCTTT
CTTCCTGTTTCGACGGAACCAACCAACTCTGACCATCGCTTTGACCACTCTTCAATCCTT
CTCCGGTTGTGATCTTTGTACCGGACCATAACCAACTCACTTCTAATTGGTTTAACTTGT
AGTGTTATTGAAGATTCATAAATCAACAGAAACAATGTAGAAAGGTCATGGAACCAGACA
TGAGACATGAATGAAAGATGAAAGAAAAATATGAGATATAGAGAGAAAATGATCTAAGCA
TTTTTGAGGAGCTTCAAGGTCTTTTCTGTGTACTGCTTGAGCATCACATAGTTTAGGATT
GGAACTAACTGCTCAACCAAATCAAGATTCAGAATCTTTGATT
   
Sequence Name 47-K114085-0022-948-H02C-8409
GenBank Accession LN506263 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>47-K114085-0022-948-H02C-8409
TTACAATTACATTGAAGCCATTTACATATTATCGAATCCCTCTTTGATCTACCAAACAAA
TGGTACCGAGCCATCCATCATACATACTTGCTACAACTTGCTATGTCTCTCTTCATCATG
TATGTAATCTAACATAAGAAAAATTAATAAGAGGGAAAAAATGAGACGAGCTTCTGTCAT
TGTTTCAACTTGTTCAAATCAAAGATTCTGAATCTTGATTTGGTTGAGCAGTTAGTTCCA
ATCCTAAACTATGTGATGCTCAAGCAGTACAACAAGAAGACCTTGAAGCTCCTCAAAAAT
GCTTAGATCATTTTCTCTCTATATCTCATATTTTTCTTTCATCTTTCATTCATGTCTCAT
GTCTGGTTCCATGACCTTTCTACATTGTTTCTGTTGATTTATGAATCTTCAATAACACTA
CAAGTTAAACCAATTAGAAGTGAGTTGGTTATGGTCCGGTACAAAGATCACAACCGGAGA
AGGATTGAAGAGTGGTCAAAGCGATGGTCAGAGTTGGTTGGTTCCGTCGAAACAGGAAGA
AAGGTAGAGCCTTTTTGACAATTTGAAGAAAATAGCAAAGATCTACTTTTCCACATACGT
TTTCGACGCCGTAATGAGTCAGAAACAACTAGGGCCTCTCGTTTTAGAAGAAAAGAGAGC
AAAAAAACCTTATCTTTGTGACTTTCGGTGGTGTGTGTGATGTTGTTGTCGGTCATGGCG
AAGACAGAGCTACGATCTCTCTCTTTTTCCTCTCTTATGTGTCTATCTTCGAACAGAGTC
TCTCAGAAACGACCCAGCCACTCTTTAAAACTCCATTGGAAAAGCTTTGTCCTGTTTTGA
TATCCATGGCTTTACCTTGGTGCTTAAAGACTGGAGTTTTACGTCTCCGGCCGCCGGATT
TTATCATCCATCGGACAGTGGCTT

Last Updated on 06.12.2018 16:11