Sequences from confirmation amplicon


Confirmation sequences for line SALK_018034 and hit At5g59470 are shown.
Line ID SALK_018034
Locus At5g59470 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:23979190
Primers used for PCR 52wx - LBb3, show primer details
   
Sequence Name 29-K118859-SALK_018034C-52wx
GenBank Accession LN485119 [GenBank]
Sequencing primer gene specific primer, 52wx: 5'-CAACTTGAGGAGAAAACAATGGAT-3'
Sequence (A. th genome BLAST matches underlined)
>29-K118859-SALK_018034C-52wx
ATCGGATCTCTCCGTAACGGTGAGTTTCCGGCGAAAGATTGTCTTCTTCCTCTCATTTCA
AAGCTACTCGGTTACTTCCTCGTCGCTGCTTCAATGACCGTTAAGCTTCCTCAGGTTGGT
TAATTCAATCAATCAATCAATCACTATGATTTTACAACCCTAATATCTCTAAACTGAATT
GAACTTCTATTGTTGTAGATAATGAAAATCGTGGACAACAAGAGTGTAAAAGGCCTAAGT
GTTGTAGCATTTGAGCTTGAAGTGATTGGTTACACAATCTCACTTGCTTACTGTCTTAAC
AAAGACCTTCCTTTTTCAGCTTTTGGTGAATTAGCTTTTCTTTTGATCCAAGCTTTAATC
TTGGTGGCTTGTATCTACTATTTCTCACAACCTCTCTCTGTAACAACTTGGGTCAAAGCA
ATTCTTTATTTTGCTATAGCACCAACTGTGTTTGCTGGTAAGATTGATCCTTTTCTTTTT
GAAGCTCTTTATGCTTCTAAGCATTTGATATTTCTCTCTGCAAGAATCCCTCAGATTTGG
AAGAACTAAACAAAAAAACCACACCAGGAAACAAATTGACGCTTAGACAACTTAATAACA
CATTGCGGACGTTTTTAATGTACTGGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAAC
AGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTT
TGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTCC
   
Sequence Name 05-K118858-SALK_018034C-R210
GenBank Accession LN484416 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>05-K118858-SALK_018034C-R210
GTCATTTGTTCCTGGTGTGGTTTTTTTGTTAGTTCTTCCAATCTGAGGGATTCTTGCAGA
GAGAAATATCAAATGCTTAGAAGCATAAAGAGCTTCAAAAAGAAAAGGATCAATCTTACC
AGCAAACACAGTTGGTGCTATAGCAAAATAAAGAATTGCTTTGACCCAAGTTGTTACAGA
GAGAGGTTGTGAGAAATAGTAGATACAAGCCACCAAGATTAAAGCTTGGATCAAAAGAAA
AGCTAATTCACCAAAAGCTGAAAAAGGAAGGTCTTTGTTAAGACAGTAAGCAAGTGAGAT
TGTGTAACCAATCACTTCAAGCTCAAATGCTACAACACTTAGGCCTTTTACACTCTTGTT
GTCCACGATTTTCATTATCTACAACAATAGAAGTTCAATTCAGTTTAGAGATATTAGGGT
TGTAAAATCATAGTGATTGATTGATTGATTGAATTAACCAACCTGAGGAAGCTTAACGGT
CATTGAAGCAGCGACGAGGAAGTAACCGAGTAGCTTTGAAATGAGAGGAAGAAGACAATC
TTTCGCCGGAAACTCACCGTTACGGAGAGATCCGATTGCGCAGCTCAAGTCGATTCCTAG
ATAATCCATTGTTTTCCCTTCAAGTTG

Last Updated on 06.12.2018 16:11