Sequences from confirmation amplicon


Confirmation sequences for line SALK_102810c and hit At3g47833 are shown.
Line ID SALK_102810c
Locus At3g47833 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:17650080
Primers used for PCR 15ck - LBb3, show primer details
   
Sequence Name 29-K108444-SALK_102810C-15ck
GenBank Accession LN485100 [GenBank]
Sequencing primer gene specific primer, 15ck: 5'-ATGCATCTTTGAGGAGATTCAAGT-3'
Sequence (A. th genome BLAST matches underlined) 
>29-K108444-SALK_102810C-15ck
ATTGAAGATTGGAGATGTGCTCACAGTTGTCGTTGTCGCTGGTATGTGAAGTTCTTTTCT
TTACATGATCAGTTTCTTTTTTGTTGTGATTCATCTTGTACCATATAGGATGAATCTGAA
CTTGGTAGTCACTGATAAAAGTGTTTAGAGATTCACTTTAGGATGTTTTTTGTTGCGATT
CATCTTATAACAGATTTTTCTGTTATCGATCAAGAAAAGCTGCAGATGAAAATGTATCCT
TAGTTTTCTGAAGATGTTCTTGTGCTTTACCATATTATCTGATCATGTTTTCATATAAAC
AGTGGAAGTAAATTGGATAGTAGATAATGTAGTAGCTGGGATGGTTTAGATGGTGGTAT
   
Sequence Name 13-K108443-SALK_102810C-R210
GenBank Accession LN484632 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined) 
>13-K108443-SALK_102810C-R210
GTCATTTGGGCCGGCTGTATTTGTTTAGCGTCAAAGTTAAACTCTACAATACATCACTAG
AGAAGAGCACAGAGAATGCTTTAGTGAATTTGGATTTCAATAATCAATGAGCTCGTGATT
CCATGTAAAGCGATTTGGATTTCTGGAAGACAAATACAAGGTTTCGCCATAGGACAATTA
CAAAATCCTTTTCGTTTCTTCACTTATTCAAAAGCCAAACATGAGTAACAAGATGAATAT
CTGAGATTGCTAAAAAGGGAGATAAAGAAACTCATGAGCTTCCTCATGCAGCCTGAGCTT
CCTTTCTCATCACTCTCGCATAGATCTCATAGCAGCATCCTGAAACAAGCACACATCAGA
AGGCAATCCAACTCAAGACACACAAAACTATGTCATCAACACCTAACTATATGAGCTACA
CACACTATTCTACTAAGTGCTGATTATATCTAAACAGAGGATGCAATAACATTAATTCAA
TGGAGATACCATTGGCGAGATACCACCATCTAAACCATCCCAGCTACTACATTATCTACT
ATCCAATTTACTTCCACTGTTTATATGAAAACATGATCAGATAATATGGTAAAGCACAAG
AACATCTTCAGAAAACTAAGGATACATTTTCATCTGCAGCTTTTCTTGATCGATAACAGA
AAAATCTGTTATAAGATGAATCGCAACAAAAAACATCCTAAAGTGAATCTCTAAACACTT
TTATCAGTGACTACCAAGTTCAGATTCATCCTATATGGTACAAGATGAATCACAACAAAA
AAGAAACTGATCATGTAAAGAAAATAACTTCACATACCAGCGACAACGACAACTGTGAGC
ACATCTCCNATTCTTTTCAATCTATGAACACCTTTCTTATGCGACTTGAATCTCCTC

Last Updated on 06.12.2018 16:11