SimpleSearch - Line and FST details


Line specific information

 
Line ID 650H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N462400)
Segregation Analysis 50:50:40
Confirmed for Hit At2g05420
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g05420

 
Sequence (A. th genome BLAST matches underlined) 
>96-K021277-022-650-H12-8409
AGCCATTTACAATTGAATATATCCGAGAATTGATTTACTAAAGTTAGAGAAAACTTTTAA
GATAAATGTTTACAACATAACATAAACCATAAAATAGAGCAAGCATAGAGAACAATAACC
TGTTAGTTTGGAGAGTTTTTCTGATTTTTGATTTACTAAAGTAAGAGAAAATTTAGTGTG
TCTTGTCCATCCAATAGGGAAAGATTTACTATTAGCAACGTTTAAATACAGAGCCAAATT
ATTAGCCCTATAAGCCAAATAAGTCGCCTTTTCATTTCCCTTGGGATAGGCCTTAAGACG
CCTGCAAGCAAAAACCAAAGTAAAATAATCAGCTAAACCCATATTCTATGGGATCCTCCC
TATAGTGAGACTATGGGATCCTCCCTGTATTGAGGCTATGGAATCCTCCCTATATTGAGT
CCACGGAATTGTCCCCCCCCTTTTAGACGTGAATGTTCACTCCTCTAAATAAACATTTCC
GAATTACAATTATTTGGTTAATGCTTTCACCCAAA
GenBank Accession BX660155 [GenBank]
Graphic View Graphic view of gene At2g05420
Predicted Position of Insertion Chr2:1984370 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F16J10
Hit Gene Code At2g05420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRAF-like family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX660156 [GenBank]


Last Updated on 10.06.2021 13:37