SimpleSearch - Line and FST details


Line specific information

 
Line ID 031E03
Vector Used pAC106
Line Availability available as T3 set from NASC (N402931)
Segregation Analysis 50:26:20
Confirmed for Hit At5g44565
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g44565

 
Sequence (A. th genome BLAST matches underlined) 
>21-K113047-0022-031-E03-8409
ACCCGAGTGCATTTATCAAAATCTACCATGGACGGCAGCTAGTCGTTTTATCAAAATGTA
CTTTCATTTTATAATAACGCTGCGGACATCTACTTTTTTGAATTGAAAAAAAATTGGTAA
TTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGCTGATCCATGTAGATTTCC
CGGACATGAAGCCATTTACAATTGAATAATATTGATTGGTTGGATCAACAAAATATATGT
CTTTTTTTAACCCGAGTTCATTTATCAAAATCTACCCTGCCCAGCACGCTATNNNNTTNN
NNTNNNNTCNNTNNTTGATCACCTCCTTAATTTAATAATTATGCACTTTGCTTCTAATAT
ATATTAAATTTGTCTAACCTGCCCGGCCGCTATNNNNNNNNNNNNNNNNNNNNNNNNNNT
TTTTTTTATTAANATAANNTGAAGGANAATGATGGTTAATTATAATNACAATACATCTTT
ATAAACACCACCATCACCAACTAAACAAAGTGGTGGTGGTCGGAATAAGNACTCACCCTT
CATTACTTTCTATAAATAATAATTGATCACCTCCCTACCTTATAATTATGCACTTAGCTT
CCTACTATTAAAAATTTGTCTACC
GenBank Accession FR800880 [GenBank]
Graphic View Graphic view of gene At5g44565
Predicted Position of Insertion Chr5:17952412 - go to primer design
BLAST e Value 1e-26
Hit Clone Code (BAC ID) MFC16
Hit Gene Code At5g44565 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL762995 [GenBank] FR800881 [GenBank] FR800880 [GenBank]


Last Updated on 10.06.2021 13:37