SimpleSearch - Line and FST details
Line specific information
| Line ID | 464D02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N444486) |
| Segregation Analysis | 50:5:3 |
| Confirmed for Hit | At5g54680 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g54680
| Sequence (A. th genome BLAST matches underlined) | >12-K019011-022-465-D02-8409 GATCATGATATTTCCCGGACATGAAGCCATTTACATTGACCATATACAGAACTAATTTCG CGAACCTATGCGTGCTACTGGCATCGTCCCTAGAAATCAGAACGATCACCGCCTCGCTCC CATTTATCAATCTCGCTTATGCATGACAGGAGGATGGCATATCGAACAATTGAGTTGAGA GAACCTCCTGTCTGACTTTTAATCAACTACATTGTGATTCAACCTTCACTGGATGCGATG GAATCCTCGACTGTAGTGAAGGCTTTGTTTGCGTATCCGACGGTGATAATGGTCTCTCAA TGAATAACGAACCTGCATCTCCATGGAAGAGTCTGTCCGAAACAAAATGTTGCTTCTTTA GCTAGGCAATATTTTCACAAACCACTGAGACAATGAAGCGAAAGATGAAGACGGATTTAA CTCCCTATAGAAAACTCGCAATTGCCCTTTGGACATCAGAGACAGTTGCTTGAATAATTT CGGAGAATACATTCCTGACATGCTCGCGCATGTCGACAAAGACGTGCTCCGTCTCATTGA GTCAAAATACAATCTTGATGATCTGTCCGCCGAGCTTTTGTGTGAGCTGTGTTACGACCT CTAATTGAATCTTTGACACCATGACAAGTGGAGACCCTCAATGGTAGGACCCCGAGAATC GGCGAAGAGATCCTCCCCAAGAGGTGGAAATGATATGTTAAGTTAGGAAATTTGGCCCTC CGGAAAAAGAATTAAGGTTTGTTTATCTAAAGTCAACTG |
| GenBank Accession | FR810656 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:22217090 - go to primer design |
| BLAST e Value | 4e-10 |
| Hit Clone Code (BAC ID) | MRB17 |
| Hit Gene Code | At5g54680 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Line 464D02 has other hits detected, show all hits of this line |
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Last Updated on 10.06.2021 13:37 |
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