SimpleSearch - Line and FST details
Line specific information
| Line ID | 061C04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405788) |
| Segregation Analysis | 100:97:94 |
| Confirmed for Hit | At5g66210 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g05340
| Sequence (A. th genome BLAST matches underlined) | >27-K016089-022-061-C04-8409 GAAGTTTGTAGCAGCAGCTCTACATGTTCATCAACTATGGGATCCTCCCTATAGTGAGTA TGAAAGAAAAAGAANCNCTNGGTCATAATGTTTACACTATGGGATCCTCCCTATAGCGAG AGAGAAAACAAGNACCATTTGCAGCTTGCTTAAATACATGACCTCACATCACGAACACAA CGAACAAGATCGCAAAAACCTCGCGGCTCTATAACCCGTGAAGCACACTTCGGAAATTCA AACGAATTAATCACTGAAGTAGAAGGATGAGGAGGCGACGAACAATACCATTGGTGATCA ATACGAGGACGGTGCAGGAGAAATGCAGTGGTTGGTTTGGGAACATATCACGGAATCTAT AGATTCTCTCTCTGGTCTATGGCGGGGTCTATCGACACTATGGGATCCTCCCCTATAGGA GACTCGGAAATTCTCAAAAGCAACCCAATACCAAATACACGCGAAAACCCATACAAACAA CACCCACAGACACAGAAACACACCGATAAACAACCTCCCCCCCGAACAGCCCTCCTATGT ATCGCGTAGGCCAACCCCCAATTACAATAGCATGCCGTCACAACCCGCGCAAACGGAAGC GCCCCACATCCCCCACAAAGAACCCCCCGAACCGCCCAAAGCCACGCAAACCGACCCGCA AAACCCCGCCCCGAGGGGAAAACCCCCCGGCGTGCCTATAATACAAACGCCACCCCGCCA ATCACCGTACCGAAAACCGAAAACCATAGTAAA |
| GenBank Accession | BX942863 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:1947527 - go to primer design |
| BLAST e Value | 2e-86 |
| Hit Clone Code (BAC ID) | F5G3 |
| Hit Gene Code | At2g05340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
Gene hit At5g66210
| Sequence (A. th genome BLAST matches underlined) | >27-K016089-022-061-C04-8409 GAAGTTTGTAGCAGCAGCTCTACATGTTCATCAACTATGGGATCCTCCCTATAGTGAGTA TGAAAGAAAAAGAANCNCTNGGTCATAATGTTTACACTATGGGATCCTCCCTATAGCGAG AGAGAAAACAAGNACCATTTGCAGCTTGCTTAAATACATGACCTCACATCACGAACACAA CGAACAAGATCGCAAAAACCTCGCGGCTCTATAACCCGTGAAGCACACTTCGGAAATTCA AACGAATTAATCACTGAAGTAGAAGGATGAGGAGGCGACGAACAATACCATTGGTGATCA ATACGAGGACGGTGCAGGAGAAATGCAGTGGTTGGTTTGGGAACATATCACGGAATCTAT AGATTCTCTCTCTGGTCTATGGCGGGGTCTATCGACACTATGGGATCCTCCCCTATAGGA GACTCGGAAATTCTCAAAAGCAACCCAATACCAAATACACGCGAAAACCCATACAAACAA CACCCACAGACACAGAAACACACCGATAAACAACCTCCCCCCCGAACAGCCCTCCTATGT ATCGCGTAGGCCAACCCCCAATTACAATAGCATGCCGTCACAACCCGCGCAAACGGAAGC GCCCCACATCCCCCACAAAGAACCCCCCGAACCGCCCAAAGCCACGCAAACCGACCCGCA AAACCCCGCCCCGAGGGGAAAACCCCCCGGCGTGCCTATAATACAAACGCCACCCCGCCA ATCACCGTACCGAAAACCGAAAACCATAGTAAA |
| GenBank Accession | BX942863 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:26457083 - go to primer design |
| BLAST e Value | 1e-10 |
| Hit Clone Code (BAC ID) | K2A18 |
| Hit Gene Code | At5g66210 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | calcium-dependent protein kinase 28 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |