SimpleSearch - Line and FST details


Line specific information

 
Line ID 043B11
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit K20J1

 
Sequence (A. th genome BLAST matches underlined) 
>82-K015511-022-043-B11-8409
ATGGGTCGAGGAAATGGAATCCTATGGGATCCTCCCTATAGTGAGATGAAACCTTTTGTT
TTCCAAAAATTGGGGGGAGAAACCCAAAACCCCTTTTAAATTTTTTTTTTTCTTAAGGTT
GGGTTTTGGAAATTTTTTTGGAAACCCCCCCTTTTTTGGGAAGCCCCTTTGGGGATCCCC
CTTTTAGGGGGGGGGNNNNNNNNACNCANAANATTTCTTCTTACATAAAGTGTTGAAGAG
GACAAGCAAGGGGTCCATGATATGGAACCCCCACATATGAATGATTGTGCAAAGACAAAT
ACACAGGGACTAAAGGCCTCATTATGATTATACTCGTCCATCGATATTTCGCATTTTTTT
TTACTGCGGATGCATCAATGTACCAAAGACCAAAACCATGTGTTCCTTAAAAA
GenBank Accession FR801246 [GenBank]
Graphic View Graphic view of sequence FR801246 of line 043B11
Predicted Position of Insertion Chr5:19897039 - go to primer design
BLAST e Value 7e-12
Hit Clone Code (BAC ID) K20J1
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit CR395879 [GenBank] FR801246 [GenBank]

Gene hit At5g67420

 
Sequence (A. th genome BLAST matches underlined) 
>07-011521-rosso-B11-35St
TGGCGTAAGGGATGACGCACAATCCCACTATCCTTCGCAAGACCCTTCCTCTATATAAGG
AAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTT
CGGTTTAAACTATCAGGGGTCAAAGACTTAGATAGAGGTCAGTCCCCTTAATTATTCATA
CTTTTGTCCTTTTTTTAAGATCTTGTAATGTTCTTGTTTAAATTCATAATACATACACAC
GATCGTGTATAATGCATGAACTAAAATCAAGCTAGGCTACTTTACGGGGCAT
GenBank Accession AL763917 [GenBank]
Graphic View Graphic view of gene At5g67420
Predicted Position of Insertion Chr5:26906479 - go to primer design
BLAST e Value 2e-55
Hit Clone Code (BAC ID) K8K14
Hit Gene Code At5g67420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LOB domain-containing protein 37
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37