SimpleSearch - Line and FST details
Line specific information
Line ID | 043B11 |
Vector Used | pAC161 |
Line Availability | not available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit K20J1
Sequence (A. th genome BLAST matches underlined) | >82-K015511-022-043-B11-8409 ATGGGTCGAGGAAATGGAATCCTATGGGATCCTCCCTATAGTGAGATGAAACCTTTTGTT TTCCAAAAATTGGGGGGAGAAACCCAAAACCCCTTTTAAATTTTTTTTTTTCTTAAGGTT GGGTTTTGGAAATTTTTTTGGAAACCCCCCCTTTTTTGGGAAGCCCCTTTGGGGATCCCC CTTTTAGGGGGGGGGNNNNNNNNACNCANAANATTTCTTCTTACATAAAGTGTTGAAGAG GACAAGCAAGGGGTCCATGATATGGAACCCCCACATATGAATGATTGTGCAAAGACAAAT ACACAGGGACTAAAGGCCTCATTATGATTATACTCGTCCATCGATATTTCGCATTTTTTT TTACTGCGGATGCATCAATGTACCAAAGACCAAAACCATGTGTTCCTTAAAAA |
GenBank Accession | FR801246 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:19897039 - go to primer design |
BLAST e Value | 7e-12 |
Hit Clone Code (BAC ID) | K20J1 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | CR395879 [GenBank] FR801246 [GenBank] |
Gene hit At5g67420
Sequence (A. th genome BLAST matches underlined) | >07-011521-rosso-B11-35St TGGCGTAAGGGATGACGCACAATCCCACTATCCTTCGCAAGACCCTTCCTCTATATAAGG AAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTT CGGTTTAAACTATCAGGGGTCAAAGACTTAGATAGAGGTCAGTCCCCTTAATTATTCATA CTTTTGTCCTTTTTTTAAGATCTTGTAATGTTCTTGTTTAAATTCATAATACATACACAC GATCGTGTATAATGCATGAACTAAAATCAAGCTAGGCTACTTTACGGGGCAT |
GenBank Accession | AL763917 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr5:26906479 - go to primer design |
BLAST e Value | 2e-55 |
Hit Clone Code (BAC ID) | K8K14 |
Hit Gene Code | At5g67420 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | LOB domain-containing protein 37 |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |