SimpleSearch - Line and FST details


Line specific information

 
Line ID 055G03
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F14M4

 
Sequence (A. th genome BLAST matches underlined) 
>23-K012479-022-055-G03-8409
NTGATCCATGTAGATTNTCCCGGACACTGACAGCCTCTACATCCTACGTTTTTCAGATTT
GCGGGTCGCTAGACACTAAAAACATACACGTTACTAGCTTAACGCCTATGTGATCGTTCT
GATCGTGACGATATCGCTACTATAACCCCCTGTTTCTTCAATCCCAAGTCTTTTCAGCTT
TCTCGGATATAGCTGATTCACCTAATGGCAAGGTTTACGTGCTTCCTGATTGGGTTCCTC
ACTGGAATCCTCCATCTCCTCACTATGGGATCCTCCCTATAGTGAGGAGAAGGTGGATGA
CAGGCCGTTCATTGATCTGTAACAACGATCGAACATAACTGCTCCTCCTAAATTATCCGA
TAACTTCTCCTAGTCCTTACATCAACTTACGCGATCCACTCTATGAGTATTGTATCCTTA
TACTCGGTCCATGTAGGCATAAAAATCTTTTTACTACACCAGAGAGTCATGCCCTTTCTC
TCTTTCGAGCACACCAAAGTGCCAATCCACCCGGAGAGTACTAGGATCCTTTTGGAGAAA
TCGATCTTAGGTACTGGTTCCAGCTCTCCGTTAAAATTCCTAA
GenBank Accession AL754842 [GenBank]
Graphic View Graphic view of sequence AL754842 of line 055G03
Predicted Position of Insertion Chr2:19341049 - go to primer design
BLAST e Value 3e-60
Hit Clone Code (BAC ID) F14M4
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit FR801886 [GenBank] FR801886 [GenBank]

Gene hit F2O15

 
Sequence (A. th genome BLAST matches underlined) 
>23-K012356-022-055-G03-8409
GTGATCCATGTAGATTTCCCGGACATGAAGCGCTCTACATAAAGGTTTTTCCGGTTTGCG
GGCCGCAACGACACTAACAATCATACACGTTCCAAGCTTAACGTTGATGGGATCGCTCCT
TAATCGAGAGCCATGTTGACTACATATGGGATCCTATTTGTAAGGAGTCGAATCTGCTCG
ACCAAAAAGCTTCAAAAGTATGAATCCTAGGGAAACTTTAAAAGAAGGCTATGGGATGCT
CCCTAAAGGGAGTCCTATATCTCATCTCTATTGGCACGTACATATATGCGGATAACTATA
TTTCACAGATTATCCCCTCTAACCTAAATATTAATTTATATCTATAGAAGCCATGACATA
TAGCCATAGCCGAACTTTTAGATTTATTACTATGAAGCACCCCTCAACTCTTTTAAATAC
TTGAAAATAGATAATTTTAAAATTAATGAGTAAAGATATATTCTTGGAAAAAAAATTAGT
GTGTAATTATAACATTCCATATAAAAAATCTTAGATTTCTTCAAAGATAAGACCTATGGG
ATCCTCCCTATAGGGAGTCCAATTAACCCTCAGGGGG
GenBank Accession AL754840 [GenBank]
Graphic View Graphic view of sequence AL754840 of line 055G03
Predicted Position of Insertion Chr5:23966478 - go to primer design
BLAST e Value 1e-71
Hit Clone Code (BAC ID) F2O15
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37