SimpleSearch - Line and FST details
Line specific information
| Line ID | 125E10 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g20760
| Sequence (A. th genome BLAST matches underlined) | >77-K012814-022-125-E10-8409 NTGATCCATGTAGATTNTCCCGGGACATGAAGCCTTTACAATTGAATATATCCTGGATAT TGCGTCATTGCGTGAGTAAAGAAGATAGAAACAGATATAAAAACAAATTTAGTTTAATGA TCAATCAAAACTTAAAATCTAATCTATGGGATCCTCCCTATAGTGAGTCGTATAACTCAG CAGGAGAAGAGAAGCCGATGAGTCCTCGGAGACACCAAAGATCGGAAAGAAGGAGAAGCG TAGTAAGACCGTAATTGCTTCATTACGGCCTCAACAACCGCCGATTCAGGAAGAAGAAGA ACAAGGAATTGCTGATCGGAGAGCTATAAGATCTCAGTATCTTGCTCTTACCCACAAGAT CAAAGGTTACATTCTATTTCTTCTACTTTAGGGTTTTTTTTAGGGTTTTTTTTCTGACCT AACTTTTTTTTGGTACAGATGCTAAAGATGACTTGACAAAAATTGATTCTAACAAGTGCA ACAGTATCATTAATGAGGTGGAGAATTTGCACCAAAAAGGTAAATGTAAACTTGCCCCAA TTCGTTAATATATATATTCCTAAGCCTTAAACTA |
| GenBank Accession | AL764420 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:7258966 - go to primer design |
| BLAST e Value | 3e-116 |
| Hit Clone Code (BAC ID) | MOE17 |
| Hit Gene Code | At3g20760 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Nse4, component of Smc5/6 DNA repair complex |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At3g20760
| Sequence (A. th genome BLAST matches underlined) | >77-K104603-0022-125-E10-8409 AGCATTTACAATTGAATATATCCTGGATATTGCGTCATTGCGTGAGTAAAGAAGATAGAA ACAGATATAAAAACAAATTTAGTTTAATGATCAATCAAAACTTAAAATCTAATCTATGGG ATCCTCCCTATAGTGAGTCGTATTACTCACTGGGCTATGGCGACTTGGTAGCTCAGAGGG ATAGTAGATGTGGGGAGCGTTATTGTATATGGCTCCCCGTTTTTTGGGGCCCACTGAGAG AAGGAAGCCCTGAAGGGAAGGGGGCCATAGGCGCCCCGGATGGCAGGGCACTAATAGACA CTGTATCGCTTGGGACTAGGAATGATATATGGAAGGCCGATATAATTAGACATAAGTTAT TGTTTGCTGGTAGGTGTCACTAAGAAGCTGAATAGTCAGGGGAGGAATATTATGTATAGA AATGTGAAAGATGGACGTATTAGTACAGTTAAAAGGAGCTATGAGTAACAAATCGTACAA AGAGGAGGGAGGTAAAGGTTAGTATGAAGTGTAGTGAAGTTTGAAGATACGTTATGATTA TATATTGAATAGAATGGGTAGTGGAAACGGAAGTGGATAGGCTGACAGAGAAGGAATGAA ATATTGATGCTGGCGAAGGTTAGAGTGAATAAAGGAGATATAAGAAGCGCTAGAAAAATT AAGATCGTAATTGAATAATGAGTTATATAGAGTTATGAAGTTACGTAGAATAGCAGGCGA GAATAAAGAGTATAGGTTTGGGAGGATGGATAAATAAGGGAGGAAGCTGTCAGTAAGGAT TGTATATTTCATGGTGACGGTTGATAGGATGGGAGAGGTGAGACGTGAATGTATTAGTGG AATATGTTGATTTAGGGATGTTCCAGTAAGTATGTAAATTGTAGAGGGAAGCGGTGCTTA TATGCATAGACCTTTAGCGTGAGTAGAGCGGGTGGCGTGGATAAATTGGAAGCAGGGAGA GCAGGGGAGTGTGTTAAATAACTGGATATTTCTTGAAAGATGATGAGAACTCCGTGATCG GTAATATGAGAGAAAGTAGAAGTACAGGGTTACTTTAATGGAAATTTTGAAGACACGTCG GATTGCACAGTTAATGGTGTAGTAGAAGGATACTTCATATATTTAGTAGTGAGGAACGGG GANAAATCTAAGGATCTTATAGTGTATAGTATATGGTTGGTACAGAAGAGGGAAGTACTG TCGTTATTAGTATGAGTAGCTACGTGAACTGTGGTATGATATGTGGTAGAGTAACATACA GTTGGAGGAATATTAATAGTTTGGGAGAAAGAGTACATGATGGAGAACTGTTGGCTGTGT TAATTGATAGCTGAAGGTTGAATATATAGCGATGGAGAAGCGGTTTATTTAATGATGTTG TATATAATT |
| GenBank Accession | FR803665 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr3:7260011 - go to primer design |
| BLAST e Value | 1e-41 |
| Hit Clone Code (BAC ID) | MOE17 |
| Hit Gene Code | At3g20760 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Nse4, component of Smc5/6 DNA repair complex |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR803663 [GenBank] FR803663 [GenBank] |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
